Pre_GI: BLASTP Hits

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Query: NC_004088:3923804:3927844 Yersinia pestis KIM, complete genome

Start: 3927844, End: 3928155, Length: 312

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3790750:379320637932063793517312Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein5e-55212
NC_009381:460358:476247476247476621375Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein6e-55212
NC_008150:3495851:350074535007453501119375Yersinia pestis Antiqua, complete genomehypothetical protein6e-55212
NC_008149:587689:603851603851604225375Yersinia pestis Nepal516, complete genomehypothetical protein6e-55212
NC_010465:660207:672399672399673013615Yersinia pseudotuberculosis YPIII, complete genomefilamentation induced by cAMP protein Fic3e-53206
NC_009708:633054:645306645306645863558Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeFic family protein5e-53206
NC_006155:4062000:406639940663994066818420Yersinia pseudotuberculosis IP 32953, complete genome7e-53205
NC_010634:4001154:400660540066054007012408Yersinia pseudotuberculosis PB1/+, complete genomefilamentation induced by cAMP protein Fic8e-53205
NC_014618:690056:699310699310699864555Enterobacter cloacae SCF1 chromosome, complete genomefilamentation induced by cAMP protein fic2e-51200
NC_019902:1:698169817598618Thioalkalivibrio nitratireducens DSM 14787, complete genomeFic family putative cell filamentation protein3e-24110
NC_015458:3077804:308985430898543090483630Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein3e-1993.6
NC_012912:1053618:106875510687551068889135Dickeya zeae Ech1591, complete genome6e-1786.3
NC_010161:1811000:1823441182344118258132373Bartonella tribocorum CIP 105476, complete genomeBepI protein8e-0855.8
NC_020301:1449616:1465240146524014664121173Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeBep protein1e-0755.1
NC_004547:3866439:387346738734673874063597Erwinia carotovora subsp. atroseptica SCRI1043, complete genomecell filamentation protein3e-0754.3
NC_012846:1679184:1692301169230116955103210Bartonella grahamii as4aup, complete genomeBepI protein4e-0753.5
NC_005956:1521736:1521736152173615233701635Bartonella henselae str. Houston-1, complete genomePutative cell filamentation protein5e-0753.1
NC_012917:3684840:368532436853243685908585Pectobacterium carotovorum subsp. carotovorum PC1, complete genomefilamentation induced by cAMP protein Fic2e-0651.2