Pre_GI: BLASTP Hits

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Query: NC_004088:3923804:3923804 Yersinia pestis KIM, complete genome

Start: 3923804, End: 3924145, Length: 342

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:4001154:400257640025764003178603Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein3e-61233
NC_008149:587689:607927607927608265339Yersinia pestis Nepal516, complete genomehypothetical protein4e-61233
NC_005810:3272765:329055032905503290888339Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-61233
NC_006155:4062000:406237040623704062972603Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein4e-61233
NC_009381:460358:480323480323480661339Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-61233
NC_014029:729675:749906749906750244339Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-61233
NC_017154:671816:692058692058692396339Yersinia pestis D106004 chromosome, complete genomehypothetical protein4e-61233
NC_010465:660207:675604675604676206603Yersinia pseudotuberculosis YPIII, complete genomeputative phage terminase, small subunit8e-61231
NC_009708:633054:648718648718649056339Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-58224
NC_010505:4396800:441421544142154414817603Methylobacterium radiotolerans JCM 2831, complete genomehypothetical protein9e-0958.9
NC_012967:786534:791455791455792006552Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein3e-0650.4
NC_013941:3182576:318420131842013184773573Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage terminase, small subunit3e-0650.4