Pre_GI: BLASTP Hits

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Query: NC_004088:1291754:1302573 Yersinia pestis KIM, complete genome

Start: 1302573, End: 1304543, Length: 1971

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003143:2895617:2906422290642229083921971Yersinia pestis CO92, complete genomeputative carbohydrate kinase01351
NC_008149:1221637:1232474123247412344441971Yersinia pestis Nepal516, complete genomecarbohydrate kinase01351
NC_017154:3094000:3101610310161031034871878Yersinia pestis D106004 chromosome, complete genomeputative carbohydrate kinase01284
NC_013421:3237633:3257295325729532591991905Pectobacterium wasabiae WPP163, complete genomeProtein of unknown function DUF209001048
NC_015633:1702000:1702168170216817041171950Vibrio anguillarum 775 chromosome chromosome I, complete sequence5-dehydro-2-deoxygluconokinase0983
NC_008150:2785830:2803199280319928043201122Yersinia pestis Antiqua, complete genomeputative carbohydrate kinase0740
NC_008358:2257787:2272534227253422744471914Hyphomonas neptunium ATCC 15444, complete genomekinase IolC7e-173607
NC_008150:2785830:280248728024872803257771Yersinia pestis Antiqua, complete genomeputative carbohydrate kinase1e-146520
NC_008254:3980327:3995925399592539978171893Mesorhizobium sp. BNC1, complete genomePfkB1e-122440
NC_006510:1901954:1918708191870819197151008Geobacillus kaustophilus HTA426, complete genomemyo-inositol catabolism protein1e-50201
NC_009328:1903291:1917116191711619181291014Geobacillus thermodenitrificans NG80-2 chromosome, complete genomemyo-inositol catabolism protein iolC/5-dehydro-2-deoxygluconokinase6e-50199
NC_013768:418000:423224423224424201978Listeria monocytogenes 08-5923, complete genomehypothetical protein2e-49197
NC_013766:417991:423203423203424180978Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein2e-49197
NC_003210:403743:408954408954409931978Listeria monocytogenes EGD-e, complete genomehypothetical protein6e-49196
NC_007103:291000:298630298630299628999Bacillus cereus E33L plasmid pE33L466, complete sequencemyo-inositol catabolism protein3e-46187
NC_015690:1967244:202346820234682024457990Paenibacillus mucilaginosus KNP414 chromosome, complete genomeIolC1e-45185
NC_014655:17641:2061320613216171005Leadbetterella byssophila DSM 17132 chromosome, complete genome5-dehydro-2-deoxygluconokinase2e-45184
NC_016935:2567039:257369625736962574685990Paenibacillus mucilaginosus 3016 chromosome, complete genomeprotein IolC2e-45184
NC_019978:2506472:2518086251808625191051020Halobacteroides halobius DSM 5150, complete genomesugar kinase, ribokinase2e-45184
NC_009725:3763922:378273937827393783731993Bacillus amyloliquefaciens FZB42, complete genomeIolC1e-44181
NC_013891:353625:358318358318359295978Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeIolC protein1e-44181
NC_014650:2143033:2143033214303321440401008Geobacillus sp. Y4.1MC1 chromosome, complete genomePfkB domain-containing protein6e-43176
NC_015425:2072703:2087144208714420881601017Clostridium botulinum BKT015925 chromosome, complete genomePfkB domain-containing protein7e-39162
NC_008261:64678:9751597515985311017Clostridium perfringens ATCC 13124, complete genomemyo-inositol catabolism protein IolC3e-37157
NC_014039:499233:520054520054521043990Propionibacterium acnes SK137 chromosome, complete genomekinase, PfkB family4e-35150
NC_016516:463460:484287484287485276990Propionibacterium acnes TypeIA2 P.acn33 chromosome, completecarbohydrate kinase5e-35149
NC_016511:472666:493491493491494480990Propionibacterium acnes TypeIA2 P.acn31 chromosome, completecarbohydrate kinase5e-35149
NC_006085:481231:502057502057503046990Propionibacterium acnes KPA171202, complete genomecarbohydrate kinase5e-35149
NC_018681:7191008:719100871910087191946939Nocardia brasiliensis ATCC 700358 chromosome, complete genome5-dehydro-2-deoxygluconokinase3e-33144
NC_013517:4208939:4256530425653042575461017Sebaldella termitidis ATCC 33386, complete genomePfkB domain protein2e-31137
NC_014206:1618988:163702716370271637986960Geobacillus sp. C56-T3 chromosome, complete genomePfkB domain-containing protein1e-26122
NC_006510:1995916:200091620009162001875960Geobacillus kaustophilus HTA426, complete genome2-keto-3-deoxy-gluconate kinase2e-26121
NC_019978:1816940:184300818430081843970963Halobacteroides halobius DSM 5150, complete genomesugar kinase, ribokinase1e-24115
NC_019978:2532640:254241625424162543366951Halobacteroides halobius DSM 5150, complete genomesugar kinase, ribokinase2e-24114
NC_016633:14000:319463194632893948Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomesugar kinase8e-24112
NC_016048:2734563:275971227597122760680969Oscillibacter valericigenes Sjm18-20, complete genomeputative fructokinase2e-21104
NC_020210:1908000:193004519300451930998954Geobacillus sp. GHH01, complete genome2-dehydro-3-deoxygluconokinase2e-21104
NC_009328:1867971:186945518694551870408954Geobacillus thermodenitrificans NG80-2 chromosome, complete genome2-keto-3-deoxygluconate kinase5e-21103
NC_012785:638000:656515656515657486972Kosmotoga olearia TBF 19.5.1, complete genomePfkB domain protein1e-20102
NC_013642:942767:974885974885975832948Thermotoga naphthophila RKU-10, complete genomePfkB domain protein9e-21102
NC_013411:2739989:274587427458742746827954Geobacillus sp. Y412MC61, complete genomePfkB domain protein7e-21102
NC_014915:1880748:188581218858121886765954Geobacillus sp. Y412MC52 chromosome, complete genomePfkB domain protein7e-21102
NC_011884:831905:849006849006849995990Cyanothece sp. PCC 7425, complete genomePfkB domain protein2e-20101
NC_006270:3627974:365353536535353654500966Bacillus licheniformis ATCC 14580, complete genome2-keto-3-deoxygluconate kinase2e-20100
NC_014206:1745203:174520317452031746156954Geobacillus sp. C56-T3 chromosome, complete genomePfkB domain-containing protein5e-2099.8
NC_007492:3332839:3345980334598033470171038Pseudomonas fluorescens PfO-1, complete genomePfkB1e-1998.6
NC_008800:614850:636697636697637632936Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,aminoimidazole riboside kinase2e-1997.8
NC_015224:647341:669177669177670112936Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,aminoimidazole riboside kinase3e-1997.4
NC_015589:2447132:244713224471322448082951Desulfotomaculum ruminis DSM 2154 chromosome, complete genomePfkB domain-containing protein2e-1894.7
NC_008786:3915000:3935191393519139362131023Verminephrobacter eiseniae EF01-2, complete genomePfkB domain protein6e-1893.2
NC_017190:591139:614498614498615460963Bacillus amyloliquefaciens LL3 chromosome, complete genomefructokinase6e-1892.8
NC_007644:626992:641029641029641982954Moorella thermoacetica ATCC 39073, complete genomePfkB6e-1892.8
NC_000961:1303446:130708013070801308012933Pyrococcus horikoshii OT3, complete genomefructokinase1e-1792.4
NC_010483:642577:644425644425645372948Thermotoga sp. RQ2, complete genomePfkB domain protein1e-1791.7
AP010958:2911741:292615429261542927068915Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative fructokinase2e-1791.3
NC_011415:2732000:274326527432652744179915Escherichia coli SE11 chromosome, complete genomeaminoimidazole riboside kinase2e-1791.3
NC_013353:2911741:292615429261542927068915Escherichia coli O103:H2 str. 12009, complete genomefructokinase2e-1791.3
NC_011601:2614691:263157926315792632502924Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeaminoimidazole riboside kinase2e-1791.3
CP002185:2659628:265962826596282660542915Escherichia coli W, complete genomeFructokinase2e-1791.3
NC_000868:643548:656671656671657588918Pyrococcus abyssi GE5, complete genomefructokinase3e-1790.9
NC_002695:3189425:320329432032943204208915Escherichia coli O157:H7 str. Sakai, complete genomeaminoimidazole riboside kinase3e-1790.9
NC_011353:3276734:330741033074103308324915Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeaminoimidazole riboside kinase3e-1790.9
NC_013008:3231414:326228132622813263195915Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeaminoimidazole riboside kinase3e-1790.9
NC_013361:3313284:333331933333193334233915Escherichia coli O26:H11 str. 11368 chromosome, complete genomeaminoimidazole riboside kinase4e-1790.5
NC_015589:1468774:149295614929561493885930Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeribokinase4e-1790.5
NC_013941:2928000:294436029443602945274915Escherichia coli O55:H7 str. CB9615 chromosome, complete genomefructokinase5e-1790.1
NC_011899:1926000:194504219450421946004963Halothermothrix orenii H 168, complete genomeFructokinase5e-1789.7
NC_014961:335808:347856347856348779924Desulfurococcus mucosus DSM 2162 chromosome, complete genome6-phosphofructokinase1e-1689
NC_016047:2150000:2174058217405821750591002Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completefructokinase3e-1687.4
NC_012856:737170:786609786609787598990Ralstonia pickettii 12D chromosome 1, complete genomePfkB domain protein4e-1687
NC_014561:153143:159938159938160864927Pantoea vagans C9-1 plasmid pPag1, complete sequenceputative carbohydrate kinase3e-1584.3
NC_014008:114000:129457129457130428972Coraliomargarita akajimensis DSM 45221 chromosome, complete genomePfkB domain protein4e-1583.6
NC_008322:4000330:4012002401200240130091008Shewanella sp. MR-7, complete genomePfkB domain protein1e-1482.4
NC_014551:605855:628981628981629937957Bacillus amyloliquefaciens DSM 7, complete genomefructokinase FruC1e-1482.4
NC_019897:2696587:271954227195422720498957Thermobacillus composti KWC4 chromosome, complete genomesugar kinase1e-1482
NC_002655:3260500:327325032732503274167918Escherichia coli O157:H7 EDL933, complete genomeaminoimidazole riboside kinase2e-1481.6
NC_010516:359310:3714813714813724851005Clostridium botulinum B1 str. Okra, complete genomeputative 2-dehydro-3-deoxygluconokinase9e-1479.3
NC_015424:2357600:237045323704532371418966Aeromonas veronii B565 chromosome, complete genome2-dehydro-3-deoxygluconokinase2e-1377.8
NC_014364:394899:438049438049438990942Spirochaeta smaragdinae DSM 11293 chromosome, complete genomePfkB domain protein3e-1377.8
NC_020260:3457597:347212834721283473051924Cronobacter sakazakii Sp291, complete genomeaminoimidazole riboside kinase4e-1377
NC_014377:1871333:188402018840201884979960Thermosediminibacter oceani DSM 16646 chromosome, complete genomePfkB domain protein5e-1376.6
NC_009778:3454790:346932234693223470245924Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-1275.9
NC_020272:3325000:332513533251353326025891Bacillus amyloliquefaciens IT-45, complete genomefructokinase1e-1275.9
NC_011653:1339868:136087513608751361777903Thermosipho africanus TCF52B, complete genomefructokinase2e-1275.1
NC_014205:760428:762045762045762983939Staphylothermus hellenicus DSM 12710 chromosome, complete genomePfkB domain protein2e-1275.1
NC_013744:300000:341303341303342271969Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completePfkB domain protein2e-1275.1
NC_009482:87193:102086102086103057972Synechococcus sp. RCC307 chromosome, complete genomefructokinase1e-1275.1
NC_014652:666227:686033686033686971939Caldicellulosiruptor hydrothermalis 108 chromosome, completepfkb domain protein2e-1274.7
NC_014650:2097900:2104582210458221056011020Geobacillus sp. Y4.1MC1 chromosome, complete genomePfkB domain-containing protein2e-1171.2
NC_009655:1626466:163561516356151636553939Actinobacillus succinogenes 130Z chromosome, complete genomeribokinase-like domain-containing protein1e-1068.9
NC_015186:597695:618058618058618999942Acidiphilium multivorum AIU301, complete genomeputative carbohydrate kinase4e-1067
NC_009484:489398:509103509103510044942Acidiphilium cryptum JF-5 chromosome, complete genomeribokinase-like domain-containing protein4e-1067
NC_004337:3590323:394676039467603947704945Shigella flexneri 2a str. 301, complete genomeribokinase6e-1066.6
NC_016513:1761830:176742417674241768419996Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completemannonate dehydratase7e-1066.2
NC_006087:28490:6155261552625981047Leifsonia xyli subsp. xyli str. CTCB07, complete genome2-dehydro-3-deoxygluconokinase3e-0964.3
NC_017243:1558000:1568925156892515699471023Brachyspira intermedia PWS/A chromosome, complete genome2-keto-3-deoxygluconate kinase3e-0964.3
NC_009617:4436837:445690744569074457854948Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeribokinase-like domain-containing protein4e-0963.9
NC_016935:2302055:232117823211782322110933Paenibacillus mucilaginosus 3016 chromosome, complete genomePfkB domain-containing protein5e-0963.5
NC_012483:971592:989005989005989949945Acidobacterium capsulatum ATCC 51196, complete genomeputative 2-dehydro-3-deoxygluconokinase6e-0963.2
UCMB5137:2054735:208679420867942087477684Bacillus atrophaeus UCMB-5137fructokinase6e-0963.2
NC_015690:1772015:1790953179095317919631011Paenibacillus mucilaginosus KNP414 chromosome, complete genomePfkB domain-containing protein2e-0861.6
NC_007907:3722500:3732054373205437330761023Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0861.6
NC_006569:370846:371484371484372431948Silicibacter pomeroyi DSS-3 megaplasmid, complete sequence2-dehydro-3-deoxygluconokinase, putative2e-0861.2
NC_014363:1605349:161903016190301619968939Olsenella uli DSM 7084 chromosome, complete genomePfkB domain protein2e-0861.2
NC_016645:1909507:193030519303051931222918Pyrobaculum sp. 1860 chromosome, complete genomesugar kinase, possible phosphofructokinase2e-0861.2
NC_003888:3817000:3834741383474138357421002Streptomyces coelicolor A3(2), complete genomesugar kinase7e-0859.7
NC_013172:2556517:257719825771982578109912Brachybacterium faecium DSM 4810, complete genomesugar kinase, ribokinase1e-0759.3
NC_008525:1202852:122570312257031226614912Pediococcus pentosaceus ATCC 25745, complete genomeSugar kinase, ribokinase family1e-0758.9
NC_013501:1337489:1347521134752113485491029Rhodothermus marinus DSM 4252, complete genomePfkB domain protein1e-0758.9
NC_004337:3590323:3649360364936036505081149Shigella flexneri 2a str. 301, complete genomeketodeoxygluconokinase2e-0758.2
NC_013205:2332174:235315923531592354148990Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,PfkB domain protein5e-0757
NC_015602:1143038:114981511498151150741927Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeribokinase6e-0756.6
NC_010645:3239420:325865532586553259596942Bordetella avium 197N, complete genomeadenosine kinase8e-0756.2
NC_004460:973738:977252977252978181930Vibrio vulnificus CMCP6 chromosome II, complete sequenceSugar kinase, ribokinase family2e-0655.1
NC_015222:1843093:185912118591211860056936Nitrosomonas sp. AL212 chromosome, complete genomeAdenosine kinase3e-0654.3
NC_005125:839000:842920842920843909990Gloeobacter violaceus PCC 7421, complete genomeprobable sugar kinase3e-0654.3
NC_014958:3346500:336527333652733366247975Deinococcus maricopensis DSM 21211 chromosome, complete genomePfkB domain-containing protein3e-0654.3
NC_015732:684000:6840476840476850841038Spirochaeta caldaria DSM 7334 chromosome, complete genomePfkB domain-containing protein4e-0653.9
NC_011080:4177443:419515341951534196049897Salmonella enterica subsp. enterica serovar Newport str. SL254,kinase, PfkB family6e-0653.1
NC_009654:4716417:472854147285414729503963Marinomonas sp. MWYL1, complete genomeribokinase-like domain-containing protein6e-0653.1
NC_013173:1671288:168505116850511686046996Desulfomicrobium baculatum DSM 4028, complete genomePfkB domain protein1e-0552.4