Pre_GI: BLASTP Hits

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Query: NC_004061:540354:543669 Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome

Start: 543669, End: 544490, Length: 822

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is the symbiont of the aphid Schizaphis graminum and contains a large circular chromosome. Aphid endosymbiont. Almost all aphids contain maternally transmitted bacteriocyte cells, which themselves contain bacteria called Buchnera. The aphids live on a restricted diet (plant sap), rich in carbohydrates, but poor in nitrogenous or other essential compounds. It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006511:3364448:337965333796533380471819Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCshikimate 5-dehydrogenase3e-60232
NC_010067:4149298:414990241499024150723822Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-60231
NC_002695:4153394:416503241650324165850819Escherichia coli O157:H7 str. Sakai, complete genomeshikimate 5-dehydrogenase3e-59228
CP002185:3627992:364298936429893643807819Escherichia coli W, complete genomedehydroshikimate reductase, NAD(P)-binding protein3e-59228
NC_013282:3962188:397488539748853975703819Cronobacter turicensis, complete genomeShikimate dehydrogenase4e-59228
NC_004545:499709:511465511465512313849Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeshikimate 5-dehydrogenase5e-56218
NC_008513:343540:353033353033353875843Buchnera aphidicola str. Cc (Cinara cedri), complete genomeAroE2e-44179
NC_005061:214168:237684237684238568885Candidatus Blochmannia floridanus, complete genomeshikimate 5-dehydrogenase8e-42170
NC_007614:620500:620577620577621410834Nitrosospira multiformis ATCC 25196 chromosome 1, completeshikimate 5-dehydrogenase1e-41170
NC_014924:3065430:308387430838743084725852Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeshikimate 5-dehydrogenase2e-40166
NC_008577:44184:486384863849516879Shewanella sp. ANA-3 chromosome 1, complete sequenceshikimate 5-dehydrogenase2e-40166
NC_015424:4251369:427545242754524276273822Aeromonas veronii B565 chromosome, complete genomeShikimate dehydrogenase2e-37155
NC_017986:5467279:548320254832025484020819Pseudomonas putida ND6 chromosome, complete genomeshikimate 5-dehydrogenase4e-35148
NC_013016:1801000:181996818199681820777810Neisseria meningitidis alpha14 chromosome, complete genomeshikimate 5-dehydrogenase1e-33143
NC_009512:3068495:306768030676803068498819Pseudomonas putida F1, complete genomeshikimate 5-dehydrogenase1e-33143
NC_017516:364404:364404364404365213810Neisseria meningitidis H44/76 chromosome, complete genomeshikimate 5-dehydrogenase2e-33142
NC_003112:364869:364869364869365678810Neisseria meningitidis MC58, complete genomeshikimate 5-dehydrogenase2e-33142
NC_011035:1564821:158304715830471583886840Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative shikimate dehydrogenase6e-33141
NC_017511:1467090:148588314858831486722840Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative shikimate dehydrogenase6e-33141
NC_017512:1824966:184383718438371844646810Neisseria meningitidis WUE 2594, complete genomeshikimate dehydrogenase6e-33141
NC_002946:1556000:157380215738021574611810Neisseria gonorrhoeae FA 1090, complete genomeputative shikimate dehydrogenase6e-33141
NC_008767:1829500:184875318487531849562810Neisseria meningitidis FAM18, complete genomeshikimate dehydrogenase6e-33141
NC_003116:2063500:207914620791462079961816Neisseria meningitidis Z2491, complete genomeshikimate dehydrogenase7e-33140
NC_017513:1845069:186073918607391861548810Neisseria meningitidis G2136 chromosome, complete genomeshikimate 5-dehydrogenase5e-32137
NC_010120:1814592:183351518335151834324810Neisseria meningitidis 053442, complete genomeshikimate dehydrogenase6e-32137
NC_017514:1885154:190204319020431902852810Neisseria meningitidis M01-240149 chromosome, complete genomeshikimate 5-dehydrogenase7e-31134
NC_017518:2041282:205627220562722057081810Neisseria meningitidis NZ-05/33 chromosome, complete genomeshikimate 5-dehydrogenase7e-31134
NC_008786:2489104:249396824939682494834867Verminephrobacter eiseniae EF01-2, complete genomeshikimate 5-dehydrogenase5e-31134
NC_014109:393500:414783414783415619837Candidatus Riesia pediculicola USDA chromosome, complete genomeshikimate 5-dehydrogenase2e-28126
NC_014804:341663:351086351086351904819Thermococcus barophilus MP chromosome, complete genomeshikimate 5-dehydrogenase I alpha4e-23108
NC_009952:3596399:363194536319453632781837Dinoroseobacter shibae DFL 12, complete genomeshikimate dehydrogenase2e-2099.8
NC_008044:3024125:302898630289863029816831Silicibacter sp. TM1040, complete genomeshikimate 5-dehydrogenase2e-2099.8
NC_011979:3712845:373034837303483731220873Geobacter sp. FRC-32, complete genomeshikimate 5-dehydrogenase3e-1995.5
NC_014122:549932:588069588069588902834Methanocaldococcus infernus ME chromosome, complete genomeshikimate 5-dehydrogenase5e-1995.1
NC_015474:252390:275352275352276173822Pyrococcus sp. NA2 chromosome, complete genomeshikimate 5-dehydrogenase1e-1893.6
NC_008343:2389710:239037423903742391243870Granulibacter bethesdensis CGDNIH1, complete genomeshikimate 5-dehydrogenase1e-1790.5
NC_010814:1739706:176001217600121760893882Geobacter lovleyi SZ, complete genomeshikimate 5-dehydrogenase1e-1790.1
NC_015519:1888917:189192318919231892795873Tepidanaerobacter sp. Re1 chromosome, complete genomeShikimate dehydrogenase3e-1789
NC_015387:1091403:111343611134361114248813Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeShikimate dehydrogenase4e-1788.6
NC_007802:179780:187014187014187850837Jannaschia sp. CCS1, complete genomeShikimate 5-dehydrogenase2e-1686.3
NC_000868:416958:432656432656433450795Pyrococcus abyssi GE5, complete genomeshikimate 5-dehydrogenase5e-1685.1
NC_007181:141299:149768149768150559792Sulfolobus acidocaldarius DSM 639, complete genomeshikimate/quinate 5-dehydrogenase4e-1582
NC_009785:1414892:141729314172931418150858Streptococcus gordonii str. Challis substr. CH1, complete genomeshikimate 5-dehydrogenase1e-1377.4
NC_009922:42696:466674666747527861Alkaliphilus oremlandii OhILAs, complete genomeshikimate 5-dehydrogenase2e-1376.6
NC_015696:47484:660136601366789777Francisella sp. TX077308 chromosome, complete genomeshikimate 5-dehydrogenase I alpha4e-1375.5
NC_019977:253895:258493258493259314822Methanomethylovorans hollandica DSM 15978, complete genomeshikimate 5-dehydrogenase4e-1375.1
NC_015573:1979202:198059219805921981548957Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeShikimate dehydrogenase2e-1273.2
NC_012108:2542328:254495725449572545772816Desulfobacterium autotrophicum HRM2, complete genomeAroE11e-1170.5
NC_007955:2074844:209948120994812100290810Methanococcoides burtonii DSM 6242, complete genomeshikimate 5-dehydrogenase6e-1168.2
NC_017275:1705827:171580417158041716613810Sulfolobus islandicus HVE10/4 chromosome, complete genomeshikimate dehydrogenase4e-1065.5
NC_012726:1685442:169172216917221692531810Sulfolobus islandicus M.16.4 chromosome, complete genomeshikimate dehydrogenase4e-1065.5
NC_012632:1785210:179149017914901792299810Sulfolobus islandicus M.16.27 chromosome, complete genomeshikimate dehydrogenase4e-1065.5
NC_012588:1655615:166559216655921666401810Sulfolobus islandicus M.14.25 chromosome, complete genomeshikimate dehydrogenase substrate binding domain-containing protein4e-1065.5
NC_015470:831863:8318638318638332961434Chlamydophila psittaci 6BC chromosome, complete genomebifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein7e-1064.7
NC_017291:829577:8295778295778310101434Chlamydophila psittaci C19/98 chromosome, complete genomebifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein7e-1064.7
NC_015977:2807782:284480328448032845672870Roseburia hominis A2-183 chromosome, complete genomeshikimate 5-dehydrogenase1e-0964.3
NC_015518:1095879:110422611042261105014789Acidianus hospitalis W1 chromosome, complete genomeShikimate dehydrogenase substrate binding domain-containing protein1e-0963.5
NC_015151:1403500:140835914083591409162804Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeshikimate dehydrogenase substrate binding domain protein1e-0963.5
NC_005042:1719055:173579817357981736700903Prochlorococcus marinus subsp. marinus str. CCMP1375, completeShikimate 5-dehydrogenase4e-0962
NC_004741:1792442:179361417936141794480867Shigella flexneri 2a str. 2457T, complete genomeshikimate 5-dehydrogenase5e-0962
NC_016633:1798758:181916918191691820050882Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeshikimate 5-dehydrogenase1e-0860.5
NC_007963:317291:332550332550333416867Chromohalobacter salexigens DSM 3043, complete genomeShikimate 5-dehydrogenase7e-0858.2
NC_008593:2281896:230243323024332303245813Clostridium novyi NT, complete genomeshikimate 5-dehydrogenase9e-0857.4
NC_016002:2652500:267029226702922671170879Pseudogulbenkiania sp. NH8B, complete genomeshikimate dehydrogenase substrate binding domain containing protein1e-0757
NC_014614:2500301:250359825035982504434837Clostridium sticklandii, complete genomeShikimate dehydrogenase4e-0755.5
NC_012880:1585255:158825915882591589128870Dickeya dadantii Ech703, complete genomeShikimate dehydrogenase substrate binding domain protein2e-0653.1
NC_003366:863437:875075875075875890816Clostridium perfringens str. 13, complete genomeshikimate 5-dehydrogenase2e-0653.1
NC_016785:1297208:131447113144711315313843Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeshikimate 5-dehydrogenase3e-0652.4
NC_019791:99793:104742104742105488747Caldisphaera lagunensis DSM 15908 chromosome, complete genomeshikimate 5-dehydrogenase6e-0651.6
NC_008261:817295:828901828901829716816Clostridium perfringens ATCC 13124, complete genomeshikimate 5-dehydrogenase7e-0651.2
NC_014727:95875:953469534695906561Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,shikimate 5-dehydrogenase and fad-dependent oxidase domain1e-0550.8