Pre_GI: BLASTP Hits

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Query: NC_004061:237205:242241 Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome

Start: 242241, End: 243307, Length: 1067

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is the symbiont of the aphid Schizaphis graminum and contains a large circular chromosome. Aphid endosymbiont. Almost all aphids contain maternally transmitted bacteriocyte cells, which themselves contain bacteria called Buchnera. The aphids live on a restricted diet (plant sap), rich in carbohydrates, but poor in nitrogenous or other essential compounds. It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018419:509500:5245465245465256281083Secondary endosymbiont of Ctenarytaina eucalypti chromosome,Phospho-N-acetylmuramoyl-pentapeptide- transferase1e-0861.2
NC_016632:230500:2408822408822419641083Serratia symbiotica str. 'Cinara cedri' chromosome, completephospho-N-acetylmuramoyl-pentapeptide- transferase3e-0859.7
NC_011244:319373:3335683335683346231056Borrelia recurrentis A1, complete genomephospho-N-acetylmuramoyl-pentapeptide- transferase4e-0755.8
NC_009901:4627998:4637581463758146386631083Shewanella pealeana ATCC 700345, complete genomephospho-N-acetylmuramoyl-pentapeptide- transferase5e-0755.5