Pre_GI: BLASTP Hits

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Query: NC_003911:1265972:1308540 Silicibacter pomeroyi DSS-3, complete genome

Start: 1308540, End: 1309958, Length: 1419

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020911:3410857:3413921341392134153091389Octadecabacter antarcticus 307, complete genomeOEP family efflux transporter2e-91336
NC_009952:2217877:2221467222146722228371371Dinoroseobacter shibae DFL 12, complete genomeputative outer membrane protein tolC2e-70266
NC_009485:3579323:3599992359999236013081317Bradyrhizobium sp. BTAi1 chromosome, complete genometolC outer membrane protein1e-42174
NC_011365:1596652:1612029161202916134111383Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTolC family type I secretion outer membrane protein4e-37156
NC_016915:278000:3101973101973115581362Rickettsia rickettsii str. Hlp#2 chromosome, complete genomeouter membrane protein tolC2e-27123
NC_016930:293245:3087713087713101471377Rickettsia philipii str. 364D chromosome, complete genomeouter membrane protein tolC1e-26121
NC_017066:262839:2783752783752797391365Rickettsia typhi str. TH1527 chromosome, complete genomeouter membrane protein tolC2e-26120
NC_006142:262825:2783612783612797251365Rickettsia typhi str. Wilmington, complete genomeouter membrane protein TolC precursor2e-26120
NC_007940:266000:2793822793822807461365Rickettsia bellii RML369-C, complete genomeType I secretion outer membrane protein TolC1e-25118
NC_009883:1262000:1275208127520812765721365Rickettsia bellii OSU 85-389, complete genomeType I secretion outer membrane protein TolC1e-25117
NC_017043:990395:1027880102788010292561377Rickettsia montanensis str. OSU 85-930 chromosome, complete genomeouter membrane protein tolC2e-25117
NC_007798:703922:7089287089287102381311Neorickettsia sennetsu str. Miyayama, complete genomeouter membrane efflux protein8e-1582
NC_009832:1719149:1749485174948517508641380Serratia proteamaculans 568, complete genometype I secretion outer membrane protein, TolC family3e-1480.1
NC_013009:721823:7268207268207281421323Neorickettsia risticii str. Illinois, complete genomeouter membrane efflux protein8e-1479
NC_017192:1745114:1763507176350717660712565Arcobacter sp. L, complete genomehypothetical protein3e-1377
NC_015424:2695847:2707416270741627087411326Aeromonas veronii B565 chromosome, complete genometype I secretion outer membrane protein, TolC3e-1377
NC_020211:1704500:1734374173437417357531380Serratia marcescens WW4, complete genomeTolC family type I secretion outer membrane protein5e-1376.3
NC_015563:3203012:3203012320301232044871476Delftia sp. Cs1-4 chromosome, complete genometype I secretion outer membrane protein, TolC family5e-1376.3
NC_015722:4539:3167631676329531278Candidatus Midichloria mitochondrii IricVA chromosome, completetype I secretion outer membrane protein5e-1375.9
NC_008570:3013263:3029012302901230303401329Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeagglutination protein6e-1375.9
NC_015850:1060000:1079709107970910809921284Acidithiobacillus caldus SM-1 chromosome, complete genometype I secretion outer membrane protein, TolC2e-1273.9
NC_015942:2213710:2237484223748422388211338Acidithiobacillus ferrivorans SS3 chromosome, complete genometype I secretion outer membrane protein, TolC family3e-1273.9
NC_015566:1659288:1692765169276516941411377Serratia sp. AS12 chromosome, complete genometype I secretion outer membrane protein, TolC family4e-1273.2
NC_011753:1501868:1518258151825815195711314Vibrio splendidus LGP32 chromosome 1, complete genomeouter membrane protein4e-1273.2
NC_015567:1660462:1692777169277716941531377Serratia sp. AS9 chromosome, complete genometype I secretion outer membrane protein, TolC family4e-1273.2
NC_013173:8923:2525425254265851332Desulfomicrobium baculatum DSM 4028, complete genometype I secretion outer membrane protein, TolC family2e-1170.5
NC_020064:1547524:1575771157577115771471377Serratia marcescens FGI94, complete genometype I secretion outer membrane protein, TolC family3e-1067
NC_014166:2498500:2534884253488425366981815Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeouter membrane efflux protein7e-1065.9
NC_014166:2498500:2537520253752025389861467Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeouter membrane efflux protein3e-0963.5
NC_014836:223013:2490232490232503811359Desulfurispirillum indicum S5 chromosome, complete genomeTolC family type I secretion outer membrane protein3e-0963.5
NC_014394:3036758:3064392306439230657261335Gallionella capsiferriformans ES-2 chromosome, complete genometype I secretion outer membrane protein, TolC family5e-0962.8
NC_013851:2441407:2443743244374324450861344Allochromatium vinosum DSM 180 chromosome, complete genometype I secretion outer membrane protein, TolC family5e-0962.8
NC_008314:2611873:261187326118732612835963Ralstonia eutropha H16 chromosome 2, complete sequenceouter membrane protein2e-0860.8
NC_004663:4273143:4295324429532442967091386Bacteroides thetaiotaomicron VPI-5482, complete genomeouter membrane protein oprM precursor, multidrug resistance protein4e-0860.1
NC_016818:1795576:1844253184425318457101458Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeNodT family efflux transporter outer membrane lipoprotein5e-0859.7
NC_011979:773673:7968237968237981241302Geobacter sp. FRC-32, complete genomeouter membrane efflux protein5e-0859.7
NC_011901:491783:5140955140955154171323Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype I secretion outer membrane protein, TolC6e-0859.3
NC_004663:1499145:1508365150836515097561392Bacteroides thetaiotaomicron VPI-5482, complete genomeouter membrane efflux protein7e-0859.3
NC_012691:2614603:2689453268945326909401488Tolumonas auensis DSM 9187, complete genomeRND efflux system, outer membrane lipoprotein, NodT family1e-0758.5
NC_002939:1021297:1022466102246610237401275Geobacter sulfurreducens PCA, complete genomeouter membrane efflux protein4e-0756.6
NC_007512:771975:8013448013448026751332Pelodictyon luteolum DSM 273, complete genomeOuter membrane protein-like5e-0756.2
NC_013889:1382705:1385254138525413867081455Thioalkalivibrio sp. K90mix chromosome, complete genometype I secretion outer membrane protein, TolC family6e-0756.2
NC_006347:4031000:4050388405038840518151428Bacteroides fragilis YCH46, complete genomemultidrug efflux pump channel protein1e-0655.5
NC_016776:3973428:3992807399280739942341428Bacteroides fragilis 638R, complete genomeputative transport related, lipoprotein1e-0655.5
NC_011750:3683760:3683760368376036852411482Escherichia coli IAI39 chromosome, complete genomeouter membrane channel protein1e-0655.1
NC_010468:694943:7149747149747164551482Escherichia coli ATCC 8739, complete genometype I secretion outer membrane protein, TolC family1e-0655.1
NC_000913:3176000:3176137317613731776181482Escherichia coli K12, complete genomeouter membrane channel precursor protein1e-0655.1
CP002516:693703:7124107124107138911482Escherichia coli KO11, complete genometype I secretion outer membrane protein, TolC family1e-0655.1
NC_010473:3273882:3273882327388232753631482Escherichia coli str. K-12 substr. DH10B, complete genometransport channel1e-0655.1
NC_012759:3063285:3063285306328530647661482Escherichia coli BW2952 chromosome, complete genomeouter membrane channel protein1e-0655.1
NC_012947:708064:7267717267717282521482Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeouter membrane channel protein1e-0655.1
NC_013364:3840000:3840082384008238415631482Escherichia coli O111:H- str. 11128, complete genometransport channel protein TolC1e-0655.1
NC_013353:3787991:3788825378882537903061482Escherichia coli O103:H2 str. 12009, complete genometransport channel protein TolC1e-0655.1
NC_003228:3934770:3954153395415339555801428Bacteroides fragilis NCTC 9343, complete genomeputative transport related, lipoprotein1e-0655.1
AP010958:3787991:3788825378882537903061482Escherichia coli O103:H2 str. 12009 DNA, complete genometransport channel protein TolC1e-0655.1
NC_015164:1877981:1897648189764818990331386Bacteroides salanitronis DSM 18170 chromosome, complete genomeRND efflux system, outer membrane lipoprotein, NodT family1e-0655.1
NC_016902:693703:7124107124107138911482Escherichia coli KO11FL chromosome, complete genomeTolC family type I secretion outer membrane protein1e-0655.1
NC_016822:3485631:3485631348563134871121482Shigella sonnei 53G, complete genomeouter membrane channel protein1e-0655.1
NC_015422:3366500:3371684337168433730301347Alicycliphilus denitrificans K601 chromosome, complete genometype I secretion outer membrane protein, TolC family1e-0654.7
NC_014394:1554373:1573666157366615750331368Gallionella capsiferriformans ES-2 chromosome, complete genometype I secretion outer membrane protein, TolC family3e-0653.9
NC_010814:190673:2064722064722077311260Geobacter lovleyi SZ, complete genomeouter membrane efflux protein3e-0653.5
NC_014311:2781898:2782369278236927837541386Ralstonia solanacearum PSI07 chromosome, complete genometype I secretion outer membrane protein, TolC4e-0653.5
NC_009943:677324:6894536894536908471395Candidatus Desulfococcus oleovorans Hxd3, complete genometype I secretion outer membrane protein, TolC family9e-0652
NC_017505:1783476:1783476178347617848791404Neisseria meningitidis alpha710 chromosome, complete genomeputative periplasmic type I secretion system protein1e-0552