Pre_GI: BLASTP Hits

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Query: NC_003911:1265972:1296349 Silicibacter pomeroyi DSS-3, complete genome

Start: 1296349, End: 1296696, Length: 348

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020911:4465500:448220244822024482528327Octadecabacter antarcticus 307, complete genomehistone-like H-NS family protein5e-0856.6
NC_005085:1269787:130947013094701309778309Chromobacterium violaceum ATCC 12472, complete genomeprobable trans-acting regulatory HvrA protein6e-0752.8
NC_011386:1727203:173769917376991738055357Oligotropha carboxidovorans OM5, complete genomehistone family protein nucleoid-structuring protein H-NS1e-0651.6
NC_016002:1326500:134057913405791340884306Pseudogulbenkiania sp. NH8B, complete genomehistone family protein nucleoid-structuring protein H-NS1e-0651.6
NC_015684:2369651:238641723864172386773357Oligotropha carboxidovorans OM5 chromosome, complete genomehistone-like nucleoid-structuring family1e-0651.6
NC_015684:2369651:238555823855582385935378Oligotropha carboxidovorans OM5 chromosome, complete genomehistone-like nucleoid-structuring protein H-NS1e-0651.6
NC_011386:1727203:173853717385371738914378Oligotropha carboxidovorans OM5, complete genomeH-NS histone family1e-0651.6