Pre_GI: BLASTP Hits

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Query: NC_003888:7337453:7362943 Streptomyces coelicolor A3(2), complete genome

Start: 7362943, End: 7366827, Length: 3885

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:1872840:1889546188954618934453900Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative bacteriophage (phiC31) resistance gene pglY01786
NC_016887:1949927:1981623198162319855313909Nocardia cyriacigeorgica GUH-2, complete genomebacteriophage (PhiC31) resistance gene pglY01545
NC_014666:6940532:6960453696045369643943942Frankia sp. EuI1c chromosome, complete genomebacteriophage resistance protein PglY0931
NC_013194:3861409:3875852387585238794993648Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeputative phage resistance protein0655
NC_008757:151862:1768471768471805693723Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeputative phage resistance protein0651
NC_007645:3581114:3593467359346735971503684Hahella chejuensis KCTC 2396, complete genomeprobable phage resistance protein0645
NC_007651:72952:1398451398451435283684Burkholderia thailandensis E264 chromosome I, complete sequencepglY1e-170601
NC_013159:502928:5208065208065246633858Saccharomonospora viridis DSM 43017, complete genomehypothetical protein8e-169595
NC_007333:810381:8206628206628244473786Thermobifida fusca YX, complete genomebacteriophage (phiC31) resistance gene pglY3e-165583
NC_009142:5698100:5720356572035657241773822Saccharopolyspora erythraea NRRL 2338, complete genomebacteriophage (phiC31) resistance gene PglY5e-161569
NC_009338:3359500:3392986339298633966783693Mycobacterium gilvum PYR-GCK chromosome, complete genomeputative phage resistance protein2e-155551
NC_015859:1898693:1922130192213019260443915Corynebacterium variabile DSM 44702 chromosome, complete genomeputative phage resistance protein6e-125449
NC_010162:10676864:1069458310694583106982303648Sorangium cellulosum 'So ce 56', complete genomebacteriophage phiC31 resistance gene6e-117422