Pre_GI: BLASTP Hits

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Query: NC_003888:6853107:6861417 Streptomyces coelicolor A3(2), complete genome

Start: 6861417, End: 6862082, Length: 666

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012522:4299287:431694443169444317576633Rhodococcus opacus B4, complete genomehypothetical protein9e-45179
NC_013521:1619394:162303616230361623698663Sanguibacter keddieii DSM 10542, complete genomehypothetical protein2e-32138
NC_013169:513327:516309516309516992684Kytococcus sedentarius DSM 20547, complete genomehypothetical protein1e-28126
NC_015312:4658548:468030646803064680932627Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein4e-1478.2
NC_016113:887582:894296894296894940645Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencehypothetical protein8e-1063.9
NC_017904:2641270:266515126651512665789639Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein1e-0963.2