Pre_GI: BLASTP Hits

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Query: NC_003888:6103534:6151136 Streptomyces coelicolor A3(2), complete genome

Start: 6151136, End: 6151543, Length: 408

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013440:5944935:596213559621355962599465Haliangium ochraceum DSM 14365, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase4e-27119
NC_019897:329945:335528335528335968441Thermobacillus composti KWC4 chromosome, complete genomelactoylglutathione lyase3e-26117
NC_020126:1943092:195490219549021955531630Myxococcus stipitatus DSM 14675, complete genomeglyoxalase family protein1e-24111
NC_014666:4118000:413739941373994137869471Frankia sp. EuI1c chromosome, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase5e-24109
NC_012914:5225609:523185752318575232273417Paenibacillus sp. JDR-2, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase1e-23108
NC_009142:4046376:405106040510604051428369Saccharopolyspora erythraea NRRL 2338, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase7e-23105
NC_015690:6521740:653203065320306532446417Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein2e-22104
NC_012121:897866:912329912329912706378Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative member of glyoxalase/bleomycin resistance protein family9e-1268.9
NC_015391:448833:467161467161467550390Carnobacterium sp. 17-4 chromosome, complete genomeglyoxalase family protein4e-1167
NC_019904:5130458:513988551398855140301417Echinicola vietnamensis DSM 17526 chromosome, complete genomelactoylglutathione lyase3e-1063.5
NC_013745:104385:114386114386114808423Haloterrigena turkmenica DSM 5511 plasmid pHTUR02, completeGlyoxalase/bleomycin resistance protein/dioxygenase3e-0650.4