Pre_GI: BLASTP Hits

Some Help

Query: NC_003552:4714457:4756146 Methanosarcina acetivorans C2A, complete genome

Start: 4756146, End: 4756649, Length: 504

Host Lineage: Methanosarcina acetivorans; Methanosarcina; Methanosarcinaceae; Methanosarcinales; Euryarchaeota; Archaea

General Information: This wild-type strain (C2A; DSM2834) is the type strain of this species and was isolated from marine sediment. Anaerobic methane-producing archeon. This organism is a strictly anaerobic, nonmotile, methane-producing Archaea responsible for virtually all biogenic methane production, a process of critical importance as a key step in the global carbon cycle. This process results in the production of significant amounts of greenhouse gas. This organism is also important in production of alternative fuels and plays a role in both agricultural and waste treatment industry. Optimal growth occurs at pH 6.5-7.0.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003901:815389:831128831128831622495Methanosarcina mazei Go1, complete genometranscription initiation factor IIE, alpha subunit7e-74275
NC_018876:2760000:276128027612802761774495Methanolobus psychrophilus R15 chromosome, complete genometranscription factor IIE (TFIIE), alpha subunit5e-55213
NC_015666:1849618:186875818687581869285528Halopiger xanaduensis SH-6 chromosome, complete genometranscription factor E1e-24112
NC_003413:503315:507364507364507951588Pyrococcus furiosus DSM 3638, complete genometranscription initiation factor E subunit alpha3e-22104
NC_000961:539500:554623554623555216594Pyrococcus horikoshii OT3, complete genometranscription initiation factor E subunit alpha2e-21101
NC_000868:1386592:138659213865921387164573Pyrococcus abyssi GE5, complete genometranscription initiation factor E subunit alpha7e-2199.8
NC_019791:1272850:127920512792051279801597Caldisphaera lagunensis DSM 15908 chromosome, complete genometranscription initiation factor IIE subunit alpha8e-1786.3
NC_008818:1127575:114855211485521149073522Hyperthermus butylicus DSM 5456, complete genomepredicted transcription initiation factor IIE, alpha subunit4e-1373.9