Pre_GI: BLASTP Hits

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Query: NC_003384:109036:128603 Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid

Start: 128603, End: 129409, Length: 807

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a multidrug resistant strain of Salmonella typhi. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016825:158626:161079161079161633555Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12hypothetical protein3e-105381
NC_011415:2277559:2292971229297122942061236Escherichia coli SE11 chromosome, complete genomehypothetical protein5e-28124
NC_009801:2193000:2206546220654622077811236Escherichia coli E24377A, complete genomehypothetical protein5e-28124
NC_014121:1101093:1119777111977711211591383Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein9e-1787.4
NC_011884:3099488:3117643311764331189171275Cyanothece sp. PCC 7425, complete genomeTPR repeat-containing protein7e-1064.7
NC_011283:2627050:2633557263355726349241368Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-0756.2
NC_014217:2760898:279007627900762790996921Starkeya novella DSM 506 chromosome, complete genomehypothetical protein4e-0755.5
NC_009997:2352948:235823223582322359032801Shewanella baltica OS195, complete genomehypothetical protein4e-0755.5