Pre_GI: BLASTP Hits

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Query: NC_003198:378844:396876 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 396876, End: 399850, Length: 2975

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:2488141:2488141248814124911162976Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-102375
NC_010610:1178430:1209912120991212128872976Lactobacillus fermentum IFO 3956, complete genomerestriction endonuclease1e-66255
NC_008497:1575884:1583420158342015863952976Lactobacillus brevis ATCC 367, complete genomeRestriction endonuclease3e-65250
NC_013198:1030970:1039970103997010429452976Lactobacillus rhamnosus GG, complete genometype III DNA restriction-modification system5e-65250
NC_015975:923812:9314639314639344592997Lactobacillus ruminis ATCC 27782 chromosome, complete genometype III restriction-modification system enzyme3e-50201
NC_013520:533803:5357455357455386992955Veillonella parvula DSM 2008, complete genometype III restriction protein res subunit1e-29132
NC_011837:3226500:3238737323873732417152979Clostridium kluyveri NBRC 12016, complete genomehypothetical protein7e-25116
NC_009706:3291330:3307253330725333102132961Clostridium kluyveri DSM 555 chromosome, complete genomeType III restriction-modification system, restriction subunit9e-25116
NC_010644:231486:2430022430022456652664Elusimicrobium minutum Pei191, complete genometype III restriction protein res subunit4e-1480.9
NC_014206:2266000:2268768226876822717222955Geobacillus sp. C56-T3 chromosome, complete genometype III site-specific deoxyribonuclease1e-1379.7
NC_016751:142237:1615801615801644532874Marinitoga piezophila KA3 chromosome, complete genomerestriction endonuclease1e-1379.7
NC_013411:2191514:2205716220571622086702955Geobacillus sp. Y412MC61, complete genomeType III site-specific deoxyribonuclease2e-1379
NC_014915:1331459:1345661134566113486152955Geobacillus sp. Y412MC52 chromosome, complete genomeType III site-specific deoxyribonuclease2e-1379
NC_012724:1:1339713397164413045Burkholderia glumae BGR1 chromosome 1, complete genomeType III restriction system endonuclease2e-1378.6
NC_010161:2050816:2052693205269320556682976Bartonella tribocorum CIP 105476, complete genomerestriction enzyme of type III restriction-modification system4e-1377.8
NC_010161:1844452:1846296184629618492712976Bartonella tribocorum CIP 105476, complete genomerestriction enzyme of type III restriction-modification system4e-1377.8
NC_012880:3529017:3543250354325035462342985Dickeya dadantii Ech703, complete genomeType III site-specific deoxyribonuclease3e-1274.7
NC_015635:3860570:3864724386472438678013078Microlunatus phosphovorus NM-1, complete genometype III restriction-modification system restriction subunit3e-1274.7
NC_020387:149890:1613651613651643582994Dehalococcoides mccartyi BTF08, complete genometype III restriction enzyme, res subunit5e-1274.3
NC_014169:1099024:1122307112230711255313225Bifidobacterium longum subsp. longum JDM301 chromosome, completetype III restriction enzyme6e-1273.9
NC_007681:542494:5546865546865576732988Methanosphaera stadtmanae DSM 3091, complete genometype III restriction-modification system, restriction subunit6e-1273.9
NC_014218:882118:8821188821188850842967Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeType III site-specific deoxyribonuclease8e-1273.6
NC_011745:2209288:2242621224262122455812961Escherichia coli ED1a chromosome, complete genomeType III restriction-modification system site-specific deoxyribonuclease1e-1172.8
NC_010694:436500:4584244584244614323009Erwinia tasmaniensis, complete genomeType III restriction enzyme, res subunit2e-1172
NC_013037:6281164:6300484630048463035403057Dyadobacter fermentans DSM 18053, complete genometype III restriction protein res subunit2e-1172
NC_019972:110500:1195841195841225863003Methanomethylovorans hollandica DSM 15978 plasmid pMETHO01,restriction endonuclease2e-1172
NC_004631:948054:9709219709219738812961Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-1171.6
NC_016832:948029:9685969685969715562961Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Type III restriction system endonuclease3e-1171.6
NC_015942:1920693:1931310193131019343363027Acidithiobacillus ferrivorans SS3 chromosome, complete genometype III restriction protein res subunit3e-1171.6
NC_013172:606387:6224256224256254303006Brachybacterium faecium DSM 4810, complete genomerestriction endonuclease3e-1171.6
NC_010655:1808657:1820014182001418230403027Akkermansia muciniphila ATCC BAA-835, complete genometype III restriction protein res subunit3e-1171.6
NC_013410:1591500:1592956159295615960033048Fibrobacter succinogenes subsp. succinogenes S85 chromosome,type III site-specific deoxyribonuclease4e-1171.2
NC_007519:1782067:1797091179709118000632973Desulfovibrio alaskensis G20 chromosome, complete genometype III restriction system endonuclease4e-1171.2
NC_014828:2038692:2059061205906120621893129Ethanoligenens harbinense YUAN-3 chromosome, complete genomeType III site-specific deoxyribonuclease5e-1170.9
NC_012917:985617:9875939875939905892997Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeType III site-specific deoxyribonuclease5e-1170.9
NC_010170:4463000:4489211448921144922163006Bordetella petrii, complete genometype III restriction enzyme4e-1170.9
NC_010002:4572573:4602520460252046055253006Delftia acidovorans SPH-1, complete genometype III restriction protein res subunit4e-1170.9
NC_008609:206313:2265992265992295742976Pelobacter propionicus DSM 2379, complete genometype III restriction enzyme, res subunit4e-1170.9
NC_010831:1224000:1235518123551812385923075Chlorobium phaeobacteroides BS1, complete genometype III restriction protein res subunit6e-1170.5
NC_020244:3961337:3970317397031739733193003Bacillus subtilis XF-1, complete genometype III restriction-modification system restriction subunit6e-1170.5
NC_015381:4363005:4379289437928943822973009Burkholderia gladioli BSR3 chromosome 1, complete sequencetype III restriction enzyme, res subunit6e-1170.5
NC_008752:166877:1790811790811820772997Acidovorax avenae subsp. citrulli AAC00-1, complete genometype III restriction enzyme, res subunit7e-1170.1
NC_016633:3069518:3126123312612331291613039Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomerestriction endonuclease9e-1170.1
NC_020301:1486695:1488551148855114915172967Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeputative type III restriction enzyme, res subunit9e-1169.7
NC_014555:1477934:1486883148688314897952913Helicobacter pylori PeCan4 chromosome, complete genometype III restriction enzyme1e-1069.7
NC_008054:1030994:1036955103695510392282274Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete1e-1069.3
NC_011666:2109274:2122339212233921252872949Methylocella silvestris BL2, complete genometype III restriction protein res subunit1e-1069.3
NC_017371:1601452:1614780161478016176892910Helicobacter pylori Gambia94/24 chromosome, complete genometype III restriction enzyme2e-1068.9
NC_014366:2826575:2826575282657528296103036Gamma proteobacterium HdN1, complete genomeType III restriction enzyme, res subunit2e-1068.9
NC_013124:1439915:1449743144974314527242982Acidimicrobium ferrooxidans DSM 10331, complete genometype III restriction protein res subunit2e-1068.9
NC_002936:1004570:1018023101802310210823060Dehalococcoides ethenogenes 195, complete genometype III restriction-modification system, restriction endonuclease subunit2e-1068.6
NC_020207:559310:5626435626435657533111Enterococcus faecium NRRL B-2354, complete genomeType III restriction enzyme, res subunit DEAD, DEAH box helicase3e-1068.2
NC_011837:2567691:2572491257249125736781188Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-1068.2
NC_009454:136468:1451591451591481853027Pelotomaculum thermopropionicum SI, complete genomerestriction endonuclease3e-1068.2
NC_015554:3808529:3821326382132638244393114Alteromonas sp. SN2 chromosome, complete genometype III restriction-modification system restriction subunit5e-1067.4
NC_019897:73957:1020561020561047552700Thermobacillus composti KWC4 chromosome, complete genomerestriction endonuclease7e-1067
NC_017378:1489818:1503018150301815059362919Helicobacter pylori Puno120 chromosome, complete genometype III restriction enzyme1e-0966.2
NC_018867:10238:6040760407634903084Dehalobacter sp. CF chromosome, complete genomeType III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal3e-0965.1
NC_021184:1484352:1498357149835715014253069Desulfotomaculum gibsoniae DSM 7213, complete genomerestriction endonuclease3e-0965.1
NC_008786:3845988:3852592385259238556513060Verminephrobacter eiseniae EF01-2, complete genometype III restriction enzyme, res subunit4e-0964.7
NC_017267:2326443:2337748233774823408103063Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completetype III restriction enzyme3e-0964.7
NC_014377:1943476:1960072196007219631703099Thermosediminibacter oceani DSM 16646 chromosome, complete genomeType III site-specific deoxyribonuclease3e-0964.7
NC_017354:1465925:147714414771441477677534Helicobacter pylori 52 chromosome, complete genome6e-0963.9
NC_010337:2950500:2955172295517229582403069Heliobacterium modesticaldum Ice1, complete genometype iii restriction enzyme, res subunit8e-0963.5
NC_002927:960369:9779229779229810083087Bordetella bronchiseptica RB50, complete genometype III restriction enzyme9e-0963.2
NC_008942:1198000:1224818122481812280483231Methanocorpusculum labreanum Z, complete genomehypothetical protein2e-0862
NC_017365:1466500:1478518147851814814332916Helicobacter pylori F30, complete genomeType III restriction enzyme3e-0861.6
NC_000915:1583967:1597196159719616000992904Helicobacter pylori 26695, complete genometype III restriction enzyme R protein (res)5e-0860.8
NC_018939:1583653:1597219159721916001222904Helicobacter pylori 26695 chromosome, complete genometype III restriction enzyme R protein (res)5e-0860.8
NC_008601:1560482:1577093157709315799602868Francisella tularensis subsp. novicida U112, complete genomerestriction endonuclease5e-0860.8
NC_017367:1505780:1517499151749915204142916Helicobacter pylori F57, complete genomeType III restriction enzyme6e-0860.5
NC_008245:1625715:1642331164233116452042874Francisella tularensis subsp. tularensis FSC 198, complete genomeType III restriction enzyme2e-0759.3
NC_016933:1702500:1718275171827517211482874Francisella tularensis TIGB03 chromosome, complete genomeRestriction endonuclease2e-0759.3
NC_016937:1625752:1642368164236816452412874Francisella tularensis subsp. tularensis TI0902 chromosome,Restriction endonuclease2e-0759.3
NC_011498:1571840:1582157158215715850662910Helicobacter pylori P12, complete genometype III R-M system restriction enzyme2e-0759.3
NC_009749:510266:5102665102665131392874Francisella tularensis subsp. holarctica FTA, complete genometype III restriction enzyme1e-0759.3
NC_010677:353839:3538393538393565652727Francisella tularensis subsp. mediasiatica FSC147, complete genometype III restriction enzyme1e-0759.3
NC_007880:508407:5084075084075112802874Francisella tularensis subsp. holarctica, complete genomeType III restriction enzyme1e-0759.3
NC_008369:514995:5121255121255149982874Francisella tularensis subsp. holarctica OSU18, complete genometype III site-specific deoxyribonuclease1e-0759.3
NC_008261:421000:4345364345364377003165Clostridium perfringens ATCC 13124, complete genometype III restriction-modification system, Res subunit1e-0759.3
NC_006570:1625909:1642525164252516453982874Francisella tularensis subsp. tularensis Schu 4, complete genomeType III restriction enzyme2e-0759.3