Pre_GI: BLASTP Hits

Some Help

Query: NC_003198:1908238:1915387 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1915387, End: 1915941, Length: 555

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011415:1472500:149387514938751494417543Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-90331
NC_002695:1929215:193987419398741940428555Escherichia coli O157:H7 str. Sakai, complete genomeputative antitermination protein8e-85312
NC_008563:1475500:148224914822491482905657Escherichia coli APEC O1, complete genomeputative antitermination protein3e-81300
NC_011294:1465500:147714114771411477797657Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-80297
CP002516:2580774:258799725879972588533537Escherichia coli KO11, complete genomeprotein of unknown function DUF11334e-80296
NC_016902:2580774:258799725879972588533537Escherichia coli KO11FL chromosome, complete genomehypothetical protein4e-80296
NC_011601:1269500:128493512849351285477543Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein2e-79294
NC_002655:2142587:214689321468932147411519Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933R2e-61234
NC_009436:2776410:281422228142222814800579Enterobacter sp. 638, complete genomehypothetical protein3e-52204
NC_020211:2094500:210770321077032108263561Serratia marcescens WW4, complete genomeantitermination protein3e-51200
NC_002655:2142587:214673621467362146900165Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933R7e-1270.1