Pre_GI: BLASTP Hits

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Query: NC_003198:1908238:1908238 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1908238, End: 1909704, Length: 1467

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007712:3067000:3087352308735230887761425Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-161570
NC_012967:786534:793631793631794392762Escherichia coli B str. REL606 chromosome, complete genomeputative bacteriophage protein1e-145516
NC_011001:1145508:1162044116204411636271584Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein5e-142504
NC_017033:1557981:1579903157990315812611359Frateuria aurantia DSM 6220 chromosome, complete genome2e-137489
NC_009255:1344000:1362849136284913643151467Burkholderia vietnamiensis G4 chromosome 2, complete sequencephage-associated protein3e-132472
NC_009720:4033983:4047778404777840492321455Xanthobacter autotrophicus Py2, complete genomeHI1409 family phage-associated protein7e-131467
NC_015437:1494777:1499239149923915011071869Selenomonas sputigena ATCC 35185 chromosome, complete genomephage-associated protein, HI1409 family4e-71269
NC_010577:1188438:1188768118876811899281161Xylella fastidiosa M23, complete genomephage-associated protein, HI1409 family2e-48194
NC_004556:1178897:1179227117922711803871161Xylella fastidiosa Temecula1, complete genomehypothetical protein2e-48194
NC_009708:2537557:2537557253755725389421386Yersinia pseudotuberculosis IP 31758 chromosome, complete genomephage-associated protein7e-33142
NC_003212:1713958:1736272173627217376571386Listeria innocua Clip11262, complete genomehypothetical protein2e-1997.4
NC_011283:4170369:4204453420445342059731521Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-1791.7
NC_016935:6464201:6473095647309564744891395Paenibacillus mucilaginosus 3016 chromosome, complete genomephage-associated protein, HI1409 family1e-1791.3
NC_016845:1285435:1309788130978813113081521Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-1791.3
NC_014724:1101950:1117350111735011187321383Lactobacillus amylovorus GRL 1112 chromosome, complete genomehypothetical protein2e-1687.8
NC_014121:3627588:3654059365405936555851527Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-1687
NC_014722:846084:8659588659588676281671Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein9e-1582
NC_015428:1483768:1486403148640314878481446Lactobacillus buchneri NRRL B-30929 chromosome, complete genomephage-associated protein2e-1170.9
NC_009633:4485869:4493500449350044948491350Alkaliphilus metalliredigens QYMF chromosome, complete genomephage-associated protein2e-1067.8