Pre_GI: BLASTP Hits

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Query: NC_003197:1945858:1963179 Salmonella typhimurium LT2, complete genome

Start: 1963179, End: 1963379, Length: 201

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1905454:192277519227751922975201Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1PagK4e-33139
NC_016857:1903426:192074719207471920947201Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74PagK4e-33139
NC_016856:1957263:197458419745841974784201Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SPagK4e-33139
NC_016810:1903426:192074719207471920947201Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage encoded pagK (phoPQ-activated protein)4e-33139
NC_003197:2720726:273301327330132733240228Salmonella typhimurium LT2, complete genomePagK-like protein5e-32136
NC_016810:2719779:273070027307002730927228Salmonella enterica subsp. enterica serovar Typhimurium strEndodeoxyribonuclease5e-32136
NC_016856:2773995:278454227845422784769228Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SPagK-like protein5e-32136
NC_016863:2721826:273274727327472732974228Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1PagK-like protein5e-32136
NC_016857:2719779:273072727307272730927201Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74PagK-like protein7e-32135
NC_011294:1220526:125242212524221252622201Salmonella enterica subsp. enterica serovar Enteritidis strphage encoded PagK2e-31134
NC_016856:1326503:132962613296261329826201Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SPagJ2e-26117