Pre_GI: BLASTP Hits

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Query: NC_003197:1611302:1630405 Salmonella typhimurium LT2, complete genome

Start: 1630405, End: 1631871, Length: 1467

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1574057:1587142158714215886081467Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein0880
NC_016863:1575488:1588574158857415900401467Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative coiled-coil protein0880
NC_016857:1576636:1587258158725815887241467Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative coiled-coil protein0880
NC_016856:1621279:1640382164038216418481467Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative coiled-coil protein0880
NC_016810:1576636:1587258158725815887241467Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein0880
NC_016860:1614280:1628095162809516295581464Salmonella enterica subsp. enterica serovar Typhimurium strputative coiled-coil protein0877
NC_011149:1578451:1581311158131115827771467Salmonella enterica subsp. enterica serovar Agona str. SL483,putative coiled-coil protein0877
NC_003198:1463253:1467383146738314685551173Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein0650