Pre_GI: BLASTP Hits

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Query: NC_003134:64672:76996 Yersinia pestis CO92 plasmid pMT1, complete sequence

Start: 76996, End: 77304, Length: 309

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005815:61148:101037101037101345309Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completehypothetical protein8e-53205
NC_004838:51013:546945469455002309Yersinia pestis KIM plasmid pMT-1, complete sequencehypothetical protein8e-53205
NC_017328:3088907:311385231138523114277426Shigella flexneri 2002017 chromosome, complete genomehypothetical protein1e-43174
NC_017328:1075535:109312310931231093548426Shigella flexneri 2002017 chromosome, complete genomehypothetical protein1e-43174
NC_004337:3049118:307406130740613074486426Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-43174
NC_007941:11319:154931549315918426Escherichia coli UTI89 plasmid pUTI89, complete sequencehypothetical protein1e-43174
NC_007941:11319:307263072631151426Escherichia coli UTI89 plasmid pUTI89, complete sequencehypothetical protein1e-43174