Pre_GI: BLASTP Hits

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Query: NC_002971:1523065:1530377 Coxiella burnetii RSA 493, complete genome

Start: 1530377, End: 1530724, Length: 348

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: Causes Q-fever. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015914:3317029:333797133379713338450480Cyclobacterium marinum DSM 745 chromosome, complete genomecation antiporter3e-29127
NC_011059:65414:975579755798030474Prosthecochloris aestuarii DSM 271, complete genomecation antiporter2e-26117
NC_018645:247917:259816259816260292477Desulfobacula toluolica Tol2, complete genomeNa(+)/H(+) antiporter subunit E2e-22104
NC_014655:3345204:335668533566853357161477Leadbetterella byssophila DSM 17132 chromosome, complete genomemultisubunit sodium/proton antiporter, mrpe subunit1e-21101
NC_016614:1178000:120428512042851204761477Vibrio sp. EJY3 chromosome 2, complete sequenceNa(+) H(+) antiporter subunit E4e-1890.1
NC_006322:3198829:320347732034773203953477Bacillus licheniformis ATCC 14580, complete genomeMrpE7e-1889.4
NC_015276:565701:572882572882573367486Marinomonas mediterranea MMB-1 chromosome, complete genomecation antiporter1e-1788.6
NC_019977:1621939:164657616465761647070495Methanomethylovorans hollandica DSM 15978, complete genomemultisubunit Na+/H+ antiporter, MnhE subunit1e-1788.6
NC_008260:2992813:299965529996553000149495Alcanivorax borkumensis SK2, complete genomeMultisubunit Na+/H+ antiporter, MnhE subunit, putative2e-1684.7
NC_019940:1963000:197955019795501980035486Thioflavicoccus mobilis 8321 chromosome, complete genomemultisubunit Na+/H+ antiporter subunit MnhE3e-1684
NC_016642:2573481:258611925861192586598480Pseudovibrio sp. FO-BEG1 chromosome, complete genomemonovalent cation/H+ antiporter subunit E3e-1683.6
NC_014225:1403007:141437314143731414699327Waddlia chondrophila WSU 86-1044 chromosome, complete genomemultiple resistance and pH homeostasis system, subunit E5e-1579.7
NC_016041:2420098:242877024287702429270501Glaciecola nitratireducens FR1064 chromosome, complete genomemonovalent cation/proton antiporter, MnhE/PhaE family subunit1e-1478.2
NC_018524:2423016:244655624465562446933378Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeNa+/H+ ion antiporter subunit5e-1373.2
NC_016603:3475843:348552534855253486052528Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomepH adaptation potassium efflux system E transmembrane protein2e-1270.9
NC_016051:1471782:147296314729631473466504Thermococcus sp. AM4 chromosome, complete genomeNa+/H+ antiporter module subunit MbhA1e-1168.6
NC_019903:134169:145659145659146141483Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,multisubunit Na+/H+ antiporter subunit MnhE4e-1167
NC_015474:1849509:132591325913762504Pyrococcus sp. NA2 chromosome, complete genomeputative monovalent cation/H+ antiporter subunit E3e-1063.9
NC_010725:5491491:551636555163655516853489Methylobacterium populi BJ001, complete genomecation antiporter9e-0958.9
NC_000961:1303446:130433713043371304861525Pyrococcus horikoshii OT3, complete genomehypothetical protein4e-0857
NC_005363:2172444:217819121781912178529339Bdellovibrio bacteriovorus HD100, complete genomehypothetical protein4e-0857
NC_014010:484000:495202495202495702501Candidatus Puniceispirillum marinum IMCC1322 chromosome, completecation antiporter9e-0855.5
NC_019942:987134:103587310358731036397525Aciduliprofundum sp. MAR08-339, complete genomemultisubunit Na+/H+ antiporter, MnhE subunit2e-0754.7
NC_000868:643548:661177661177661683507Pyrococcus abyssi GE5, complete genomehypothetical protein2e-0754.7
NC_013849:627811:627302627302627853552Ferroglobus placidus DSM 10642 chromosome, complete genomecation antiporter3e-0754.3
NC_013926:614206:633722633722634243522Aciduliprofundum boonei T469 chromosome, complete genomecation antiporter2e-0754.3
NC_009831:4447919:446436044643604464839480Shewanella sediminis HAW-EB3, complete genomecation antiporter2e-0754.3
NC_012883:1695703:172002217200221720528507Thermococcus sibiricus MM 739, complete genomeMembrane-bound NADP+-reducing complex MBX, subunit MbxA (Na+/H+ transporter subunit)8e-0752.4
NC_009033:653462:663229663229663732504Staphylothermus marinus F1, complete genomecation antiporter1e-0651.6
NC_017317:246155:263395263395263814420Corynebacterium ulcerans 809 chromosome, complete genomeNa(+)/H(+) antiporter subunit E2e-0650.8
NC_015683:241377:265428265428265847420Corynebacterium ulcerans BR-AD22 chromosome, complete genomeNa(+)/H(+) antiporter subunit E3e-0650.4
NC_004193:3215500:323304432330443233526483Oceanobacillus iheyensis HTE831, complete genomeNa(+):H(+) antiporter4e-0650.1
NC_008345:2717945:272446727244672724988522Shewanella frigidimarina NCIMB 400, complete genomecation antiporter9e-0648.9