Pre_GI: BLASTP Hits

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Query: NC_002947:2589951:2597776 Pseudomonas putida KT2440, complete genome

Start: 2597776, End: 2598375, Length: 600

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009937:4122652:412550141255014126244744Azorhizobium caulinodans ORS 571, complete genomeputative phage exonuclease8e-46183
NC_016944:1621575:163757516375751638435861Vibrio cholerae IEC224 chromosome I, complete sequencephage exonuclease4e-38157
NC_014834:3130715:316793931679393168655717Rhodopseudomonas palustris DX-1 chromosome, complete genome5'-3' exonuclease7e-31133
NC_010410:3166279:3189431318943131922022772Acinetobacter baumannii AYE, complete genome 5' polymerase, 5'--> 3' and 3'--> 5' exonuclease' target='_blank' title='Search database for similar gene annotations'>DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5' exonuclease9e-1063.5
NC_008321:3232000:324174832417483242530783Shewanella sp. MR-4, complete genome5'-3' exonuclease3e-0858.5
NC_014375:217612:2305332305332335172985Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeDNA polymerase I5e-0857.8
NC_015696:610000:6141616141616168512691Francisella sp. TX077308 chromosome, complete genomeDNA polymerase I5e-0857.8
NC_008025:1768756:1770264177026417729872724Deinococcus geothermalis DSM 11300, complete genomeDNA polymerase I6e-0857.4
NC_009092:3239500:326052032605203261290771Shewanella loihica PV-4, complete genome5'-3' exonuclease2e-0755.8
NC_016629:415711:4182324182324208802649Desulfovibrio africanus str. Walvis Bay chromosome, completeDNA polymerase I8e-0753.5
NC_018644:446102:4504004504004530782679Alpha proteobacterium HIMB59 chromosome, complete genomeDNA-directed DNA polymerase1e-0653.1
NC_004842:1081271:1082130108213010847242595Anaplasma marginale str. St. Maries, complete genomeDNA polymerase I1e-0653.1
NC_007519:3391090:3409221340922134120162796Desulfovibrio alaskensis G20 chromosome, complete genomeDNA polymerase I2e-0652.4