Pre_GI: BLASTP Hits

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Query: NC_002944:1881405:1886873 Mycobacterium avium subsp. paratuberculosis K-10, complete genome

Start: 1886873, End: 1887457, Length: 585

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a diary herd in Wisconsin, USA in the 1970's. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008392:1029134:107975310797531080370618Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, TetR family2e-47188
NC_010557:679656:740790740790741362573Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, TetR family3e-43174
NC_015711:7471500:747851474785147479170657Myxococcus fulvus HW-1 chromosome, complete genomeTetR family transcriptional regulator4e-1064.7
NC_016109:954538:970248970248970856609Kitasatospora setae KM-6054, complete genomeputative TetR family transcriptional regulator3e-0961.6
NC_014169:231210:234074234074234709636Bifidobacterium longum subsp. longum JDM301 chromosome, completeTetR-type transcriptional regulator6e-0960.8
NC_003155:590500:602829602829603446618Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator6e-0960.5
NC_014638:183115:204197204197204832636Bifidobacterium bifidum PRL2010 chromosome, complete genometetR family transcriptional regulator6e-0960.5
NC_008095:5527707:553484855348485535489642Myxococcus xanthus DK 1622, complete genometranscriptional regulator, TetR family1e-0859.7
NC_017904:2724941:272761627276162728188573Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator4e-0857.8
NC_020126:6344827:635200863520086352640633Myxococcus stipitatus DSM 14675, complete genomeTetR family transcriptional regulator5e-0857.4
NC_020302:3014483:304061930406193041248630Corynebacterium halotolerans YIM 70093 = DSM 44683, completetranscriptional regulator6e-0753.9
NC_007644:2452244:245224424522442452852609Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, TetR family6e-0753.9
NC_014408:1314382:133323313332331333886654Methanothermobacter marburgensis str. Marburg chromosome, completetranscriptional regulator3e-0651.6