Pre_GI: BLASTP Hits

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Query: NC_002937:1764117:1768176 Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete

Start: 1768176, End: 1768745, Length: 570

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: This strain was isolated from clay soil near Hildenborough, UK in 1946. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016629:2971860:298265329826532983267615Desulfovibrio africanus str. Walvis Bay chromosome, completetranscriptional regulator, TetR family2e-55214
NC_020409:393329:431903431903432490588Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeTranscriptional regulator, TetR family4e-38157
NC_016629:2449731:246899324689932469565573Desulfovibrio africanus str. Walvis Bay chromosome, completetranscriptional regulator, TetR family2e-1582.4
NC_013501:990022:996731996731997432702Rhodothermus marinus DSM 4252, complete genometranscriptional regulator, TetR family5e-1063.9
NC_010814:155834:160065160065160667603Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family5e-0960.8
NC_013947:1537275:155337215533721554025654Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family2e-0858.5
NC_006177:2398482:242190624219062422553648Symbiobacterium thermophilum IAM 14863, complete genomeTetR family transcriptional regulator5e-0857.4
NC_013595:9994000:100114381001143810012019582Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family2e-0755.8
NC_013929:2583849:258533825853382585931594Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator3e-0755.1
NC_009464:931647:953666953666954247582Uncultured methanogenic archaeon RC-I, complete genometranscription regulator (TetR family)3e-0754.7
NC_014966:795311:818849818849819574726Vibrio vulnificus MO6-24/O chromosome II, complete sequenceTetR family transcripitonal regulator6e-0753.9
NC_019976:22705:526135261353248636Natronococcus occultus SP4 plasmid 2, complete sequencetranscriptional regulator8e-0753.5
NC_016111:2257166:227095022709502271552603Streptomyces cattleya NRRL 8057, complete genomeTetR-family transcriptional regulator8e-0753.5
NC_014408:1314382:133323313332331333886654Methanothermobacter marburgensis str. Marburg chromosome, completetranscriptional regulator7e-0753.5
NC_010170:4463000:446747944674794468015537Bordetella petrii, complete genometranscriptional regulator, TetR family9e-0753.1
NC_013205:19295:294872948730161675Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, TetR family1e-0653.1
NC_006395:161455:186755186755187354600Haloarcula marismortui ATCC 43049 plasmid pNG700, completetranscription regulator1e-0652.8
NC_014153:2125551:213126221312622131957696Thiomonas intermedia K12 chromosome, complete genometranscriptional regulator, TetR family2e-0652
NC_020126:7661551:768145276814527682090639Myxococcus stipitatus DSM 14675, complete genomeTetR family transcriptional regulator2e-0652
NC_008750:2332000:235360923536092354196588Shewanella sp. W3-18-1, complete genometranscriptional regulator, TetR family3e-0651.6
NC_016816:2953530:298857429885742989209636Pantoea ananatis LMG 5342, complete genomeHTH-type transcriptional regulator RutR4e-0651.2
NC_015733:3595882:359744735974473598091645Pseudomonas putida S16 chromosome, complete genomeTetR family transcriptional regulator4e-0651.2
NC_006361:498305:504157504157504795639Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator4e-0650.8
NC_011740:1189455:119515711951571195795639Escherichia fergusonii ATCC 35469, complete genomeDNA-binding transcriptional regulator of the alternative pyrimidine degradation pathway6e-0650.4
NC_015224:1641819:164285416428541643564711Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative DNA-binding transcriptional regulator8e-0650.1