Pre_GI: BLASTP Hits

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Query: NC_002516:3519000:3524161 Pseudomonas aeruginosa PAO1, complete genome

Start: 3524161, End: 3524490, Length: 330

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:1994392:202881820288182029141324Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein8e-31132
NC_012660:1804610:183339718333971833747351Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein7e-1682.4
NC_009512:4375452:437890843789084379243336Pseudomonas putida F1, complete genomecompetence protein ComEA helix-hairpin-helix repeat protein8e-1682.4
NC_013416:1429881:143003814300381430367330Aggregatibacter actinomycetemcomitans D11S-1, complete genomeComE operon protein 11e-1582
NC_017986:1128879:113550411355041135854351Pseudomonas putida ND6 chromosome, complete genomecompetence protein ComEA helix-hairpin-helix repeat protein1e-1581.6
NC_020209:997385:102935310293531029685333Pseudomonas poae RE*1-1-14, complete genomehypothetical protein2e-1581.3
NC_007492:4563981:456685345668534567188336Pseudomonas fluorescens PfO-1, complete genomeCompetence protein ComEA helix-hairpin-helix region3e-1580.5
NC_014541:1231021:123408112340811234365285Ferrimonas balearica DSM 9799 chromosome, complete genomecompetence protein ComEA helix-hairpin-helix repeat protein2e-1477.8
NC_004129:4993974:500111650011165001445330Pseudomonas fluorescens Pf-5, complete genomecompetence protein comEA2e-1477.4
NC_007645:2408125:243129424312942431599306Hahella chejuensis KCTC 2396, complete genomeDNA uptake protein and related DNA-binding protein2e-1374.3
NC_009092:2902171:292841329284132928712300Shewanella loihica PV-4, complete genomecompetence protein ComEA helix-hairpin-helix repeat protein8e-1372.4
NC_020134:845164:846338846338846811474Clostridium stercorarium subsp. stercorarium DSM 8532, completecompetence protein ComEA helix-hairpin-helix repeat region1e-1168.2
NC_007575:319119:338582338582338833252Sulfurimonas denitrificans DSM 1251, complete genomehypothetical protein1e-0961.6
NC_007614:2517226:252214225221422522444303Nitrosospira multiformis ATCC 25196 chromosome 1, completeCompetence protein ComEA helix-hairpin-helix region2e-0961.2
NC_014752:324832:335935335935336234300Neisseria lactamica ST-640, complete genomeDNA transport competence protein2e-0961.2
NC_008322:2983951:300494630049463005311366Shewanella sp. MR-7, complete genomecompetence protein ComEA helix-hairpin-helix repeat protein4e-0960.1
NC_008767:1888950:190706619070661907530465Neisseria meningitidis FAM18, complete genomeputative DNA transport competence protein9e-0958.9
NC_006361:1547034:1547034154703415486321599Nocardia farcinica IFM 10152, complete genomeputative DNA-binding protein1e-0755.1
NC_010617:1467000:1472965147296514739841020Kocuria rhizophila DC2201, complete genomeputative DNA-binding protein5e-0753.1
NC_012559:2353236:236990323699032370388486Laribacter hongkongensis HLHK9, complete genomeProbable DNA transport competence protein2e-0651.2
NC_009828:1530732:154122115412211541763543Thermotoga lettingae TMO, complete genomecompetence protein ComEA helix-hairpin-helix repeat protein2e-0651.2
NC_012785:20454:420894208942883795Kosmotoga olearia TBF 19.5.1, complete genomecompetence protein ComEA helix-hairpin-helix repeat protein2e-0650.8
NC_015873:1557999:157857115785711579095525Megasphaera elsdenii DSM 20460, complete genomeComEA protein3e-0650.4
NC_004757:1021355:102587410258741026236363Nitrosomonas europaea ATCC 19718, complete genomeputative DNA transport competence protein, ComEA4e-0650.1
NC_013173:3679326:368153736815373681842306Desulfomicrobium baculatum DSM 4028, complete genome5e-0649.7