Pre_GI: BLASTP Hits

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Query: NC_001263:531188:550134 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 550134, End: 550901, Length: 768

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015161:758929:783142783142783897756Deinococcus proteolyticus MRP chromosome, complete genomehypothetical protein2e-46185
NC_007760:3948730:396271839627183963485768Anaeromyxobacter dehalogenans 2CP-C, complete genomeprotein of unknown function DUF812e-0860.1
NC_015474:1035834:105716610571661057915750Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein9e-0754.3
NC_007644:362000:376031376031376846816Moorella thermoacetica ATCC 39073, complete genomeProtein of unknown function DUF813e-0652.4