Pre_GI: BLASTP Hits

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Query: NC_001263:2574755:2588246 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 2588246, End: 2588596, Length: 351

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018515:4196409:419924841992484199607360Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeiojap-like ribosome-associated protein3e-1477.4
NC_015873:2260048:227823222782322278615384Megasphaera elsdenii DSM 20460, complete genomeiojap-like protein2e-1167.4
NC_013525:1871795:189418518941851894553369Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeiojap-like protein3e-1167.4
NC_011899:1437981:143762314376231437988366Halothermothrix orenii H 168, complete genomeiojap-like protein2e-1064.3
NC_014655:1835848:183666718366671837059393Leadbetterella byssophila DSM 17132 chromosome, complete genomeiojap-like protein2e-1064.3
NC_014220:1732254:175083517508351751155321Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeiojap-like protein1e-0961.6
NC_009348:1064664:109645510964551096796342Aeromonas salmonicida subsp. salmonicida A449, complete genomeiojap domain-containing protein3e-0960.5
NC_008095:1428665:145282614528261453191366Myxococcus xanthus DK 1622, complete genomeiojap-like protein3e-0960.5
NC_008312:7132163:713216371321637132582420Trichodesmium erythraeum IMS101, complete genomeiojap-like protein2e-0858.2
NC_016751:1700164:171206517120651712424360Marinitoga piezophila KA3 chromosome, complete genomeiojap-like ribosome-associated protein2e-0857.4
NC_006576:1435422:145591614559161456335420Synechococcus elongatus PCC 6301, complete genomehypothetical protein2e-0857.4
NC_009615:2184300:220664722066472207006360Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein6e-0856.2
NC_014623:2283253:230116423011642301688525Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeiojap-like family protein9e-0855.5
NC_015588:2200517:221924422192442219690447Isoptericola variabilis 225 chromosome, complete genomeiojap-like protein1e-0755.1
NC_015656:1830220:183319018331901833603414Frankia symbiont of Datisca glomerata chromosome, complete genomeiojap-like protein1e-0755.1
NC_007205:221539:225411225411225761351Candidatus Pelagibacter ubique HTCC1062, complete genomeiojap-related protein2e-0754.7
NC_016078:3130573:315303031530303153422393Pelagibacterium halotolerans B2 chromosome, complete genomeIojap protein3e-0754.3
NC_008752:3511006:352834535283453529136792Acidovorax avenae subsp. citrulli AAC00-1, complete genomeiojap-like protein4e-0753.5
NC_015138:2299100:230154823015482302366819Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeiojap-like protein5e-0753.1
NC_010162:5129270:514420851442085144519312Sorangium cellulosum 'So ce 56', complete genomehypothetical protein6e-0752.8
NC_005125:839000:839684839684839965282Gloeobacter violaceus PCC 7421, complete genomehypothetical protein8e-0752.4
NC_014246:1545214:154607415460741546535462Mobiluncus curtisii ATCC 43063 chromosome, complete genomeiojap family protein8e-0752.4
NC_010084:1054000:107466310746631075112450Burkholderia multivorans ATCC 17616 chromosome 1, completeiojap family protein2e-0651.2
NC_010003:2029416:203227320322732032620348Petrotoga mobilis SJ95, complete genomeiojap-like protein2e-0651.2
NC_006677:1255079:125809012580901258593504Gluconobacter oxydans 621H, complete genomehypothetical protein3e-0650.4
NC_016629:3629848:365050636505063651009504Desulfovibrio africanus str. Walvis Bay chromosome, completeiojap family protein3e-0650.4
NC_014752:324832:325499325499325885387Neisseria lactamica ST-640, complete genomehypothetical protein5e-0650.1