Pre_GI: BLASTP Hits

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Query: NC_001263:2461941:2475678 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 2475678, End: 2476901, Length: 1224

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006087:1334500:1354498135449813556371140Leifsonia xyli subsp. xyli str. CTCB07, complete genomesecreted protein1e-27124
NC_006624:1208464:122505212250521225930879Thermococcus kodakarensis KOD1, complete genomehydrolase, alpha/beta superfamily2e-1377
NC_003413:1847935:184976318497631850629867Pyrococcus furiosus DSM 3638, complete genomehypothetical protein2e-1273.6
NC_009972:791702:807753807753808637885Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genomehypothetical protein3e-0963.5
NC_000868:269923:269923269923270783861Pyrococcus abyssi GE5, complete genomehypothetical 2-acetyl-1-alkylglycerophosph ocholine esterase4e-0859.7
NC_020126:117799:147260147260148138879Myxococcus stipitatus DSM 14675, complete genomehypothetical protein7e-0858.9
NC_008340:1733735:174123817412381742125888Alkalilimnicola ehrlichei MLHE-1, complete genomealpha/beta hydrolase fold3e-0756.6
NC_017059:2084500:210059721005972101529933Rhodospirillum photometricum DSM 122, complete genomeDipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein5e-0755.8
NC_008576:3812500:381416138141613815129969Magnetococcus sp. MC-1, complete genomedipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein3e-0653.5