Pre_GI: BLASTP Hits

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Query: NC_001263:2461941:2462673 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 2462673, End: 2463179, Length: 507

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016115:62493:630256302563711687Streptomyces flavogriseus ATCC 33331 plasmid pSFLA02, completeputative ATP/GTP-binding protein6e-1580.1
NC_018750:3249756:325663532566353257195561Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein5e-1477
NC_009832:1664238:166951716695171670008492Serratia proteamaculans 568, complete genomehypothetical protein5e-1063.9
NC_015572:1:396163961640110495Methylomonas methanica MC09 chromosome, complete genomehypothetical protein6e-0857
NC_003911:1078949:110545711054571105987531Silicibacter pomeroyi DSS-3, complete genomehypothetical protein6e-0856.6
NC_010511:2079744:210918721091872109678492Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein1e-0652.8
NC_008781:654289:6720396720396735351497Polaromonas naphthalenivorans CJ2, complete genomehypothetical protein5e-0650.4
NC_010506:5195000:520872952087295209238510Shewanella woodyi ATCC 51908, complete genomehypothetical protein9e-0649.7