Pre_GI: BLASTP Hits

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Query: NC_001263:243000:243688 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 243688, End: 244404, Length: 717

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014958:1335650:135320813532081353882675Deinococcus maricopensis DSM 21211 chromosome, complete genomehypothetical protein5e-32137
NC_009712:334143:363975363975364319345Candidatus Methanoregula boonei 6A8, complete genomehypothetical protein5e-0858.2
NC_015125:1668780:169207216920721692419348Microbacterium testaceum StLB037, complete genomehypothetical protein1e-0756.6
NC_013849:376676:378692378692379045354Ferroglobus placidus DSM 10642 chromosome, complete genomeprotein of unknown function DUF863e-0755.5
NC_019940:3518670:352346335234633523834372Thioflavicoccus mobilis 8321 chromosome, complete genomehypothetical protein9e-0753.9
NC_014098:3030274:303629930362993036649351Bacillus tusciae DSM 2912 chromosome, complete genomeprotein of unknown function DUF869e-0753.9
NC_000911:1611500:161737616173761617813438Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-0652.4
NC_017039:1610602:161640416164041616841438Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein3e-0652.4
NC_017052:1610500:161639216163921616829438Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein3e-0652.4
NC_017277:1610391:161619316161931616630438Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-0652.4
NC_015636:288797:302271302271302624354Methanothermococcus okinawensis IH1 chromosome, complete genomehypothetical protein3e-0652.4
NC_011884:1029328:103972310397231040064342Cyanothece sp. PCC 7425, complete genomeprotein of unknown function DUF867e-0650.8
NC_011830:1923158:192977619297761930120345Desulfitobacterium hafniense DCB-2, complete genomeprotein of unknown function DUF868e-0650.8