Pre_GI: BLASTP Hits

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Query: NC_001263:1378605:1396769 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 1396769, End: 1397599, Length: 831

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015161:162000:174984174984175922939Deinococcus proteolyticus MRP chromosome, complete genomehypothetical protein6e-133473
NC_014831:149626:154475154475155389915Thermaerobacter marianensis DSM 12885 chromosome, complete genomehypothetical protein9e-73273
NC_010320:819326:839872839872840780909Thermoanaerobacter sp. X514 chromosome, complete genomehypothetical protein3e-70265
NC_010718:128423:131090131090131998909Natranaerobius thermophilus JW/NM-WN-LF, complete genomehypothetical protein9e-69260
NC_015555:277364:291458291458292387930Thermoanaerobacterium xylanolyticum LX-11 chromosome, completehypothetical protein1e-66253
NC_009922:490500:504023504023504946924Alkaliphilus oremlandii OhILAs, complete genomeconserved hypothetical protein2e-65248