Pre_GI: BLASTP Hits

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Query: NC_001263:1378605:1390917 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 1390917, End: 1391408, Length: 492

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014958:514225:530572530572531114543Deinococcus maricopensis DSM 21211 chromosome, complete genomehypothetical protein2e-25115
NC_013037:6209424:624634562463456246896552Dyadobacter fermentans DSM 18053, complete genomeputative outer membrane protein2e-0961.6
NC_014834:2206119:221119422111942211754561Rhodopseudomonas palustris DX-1 chromosome, complete genomehypothetical protein2e-0858.2
NC_013730:2403930:242154724215472422125579Spirosoma linguale DSM 74, complete genomeouter membrane protein-like protein6e-0856.6
NC_015138:3927411:394034539403453940986642Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein5e-0650.4