Pre_GI: BLASTP Hits

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Query: NC_001263:132288:142588 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 142588, End: 143571, Length: 984

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015161:523278:5328315328315339311101Deinococcus proteolyticus MRP chromosome, complete genometransposase IS4 family protein1e-175615
NC_001263:132288:139792139792140624833Deinococcus radiodurans R1 chromosome 1, complete sequence5e-80298
NC_015161:792955:8028388028388039391102Deinococcus proteolyticus MRP chromosome, complete genome2e-74279
NC_009939:16437:241582415825153996Deinococcus geothermalis DSM 11300 plasmid pDGEO02, completetransposase IS4 family protein5e-62238
NC_017278:1720371:1738413173841317395041092Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein2e-36153
NC_017278:258921:2668802668802679711092Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein2e-36153
NC_017278:258921:2717152717152728061092Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein2e-36153
NC_017278:48630:6760267602686931092Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein2e-36153
NC_015170:54000:6160861608626811074Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequencetransposase IS4 family protein3e-35149
NC_015161:36668:4645046450475231074Deinococcus proteolyticus MRP chromosome, complete genometransposase IS4 family protein3e-35149
NC_015161:523278:5303175303175313781062Deinococcus proteolyticus MRP chromosome, complete genometransposase IS4 family protein3e-35149
NC_013946:415028:4319264319264329901065Meiothermus ruber DSM 1279 chromosome, complete genometransposase IS4 family protein2e-33143
NC_008010:36978:4586845868469261059Deinococcus geothermalis DSM 11300 plasmid 1, complete sequencetransposase, IS44e-33142
NC_008025:1889891:1899216189921619002741059Deinococcus geothermalis DSM 11300, complete genometransposase, IS44e-33142
NC_012526:765000:7944537944537954541002Deinococcus deserti VCD115, complete genomeputative transposase1e-31137
NC_017162:270460:276845276845277414570Acinetobacter baumannii 1656-2 chromosome, complete genometransposase4e-2099
NC_010410:3886500:388653238865323887101570Acinetobacter baumannii AYE, complete genometransposase of ISAba1, IS4 family (ORF 1)4e-2099
NC_010410:513298:529677529677530246570Acinetobacter baumannii AYE, complete genometransposase of ISAba1, IS4 family (ORF 1)4e-2099
NC_014032:825793:9181029181029192531152Salinibacter ruber M8 chromosome, complete genometransposase, IS43e-1892.8
NC_009717:271385:278218278218278769552Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequencehypothetical protein7e-1271.6
NC_008010:449652:460059460059460718660Deinococcus geothermalis DSM 11300 plasmid 1, complete sequencehypothetical protein5e-1168.9
NC_017162:270460:276324276324276770447Acinetobacter baumannii 1656-2 chromosome, complete genomeIS4 family transposase3e-1066.6
NC_010410:513298:529156529156529602447Acinetobacter baumannii AYE, complete genometransposase of ISAba1, IS4 family (ORF 2)3e-1066.6
NC_010410:3886500:388717638871763887622447Acinetobacter baumannii AYE, complete genometransposase of ISAba1, IS4 family (ORF 2)3e-1066.6
NC_007677:771168:8269408269408279511012Salinibacter ruber DSM 13855, complete genome8e-0858.2
NC_014032:825793:924439924439925050612Salinibacter ruber M8 chromosome, complete genometransposase5e-0755.5