Pre_GI: BLASTP Hits

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Query: NC_001263:132288:139792 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 139792, End: 140624, Length: 833

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015161:523278:5328315328315339311101Deinococcus proteolyticus MRP chromosome, complete genometransposase IS4 family protein1e-96353
NC_015161:792955:8028388028388039391102Deinococcus proteolyticus MRP chromosome, complete genome2e-82305
NC_001263:132288:142588142588143571984Deinococcus radiodurans R1 chromosome 1, complete sequencetransposase, putative2e-79295
NC_012526:765000:7944537944537954541002Deinococcus deserti VCD115, complete genomeputative transposase2e-1479.7
NC_009939:16437:241582415825153996Deinococcus geothermalis DSM 11300 plasmid pDGEO02, completetransposase IS4 family protein5e-1478.2
NC_010410:513298:529677529677530246570Acinetobacter baumannii AYE, complete genometransposase of ISAba1, IS4 family (ORF 1)5e-1375.1
NC_010410:3886500:388653238865323887101570Acinetobacter baumannii AYE, complete genometransposase of ISAba1, IS4 family (ORF 1)5e-1375.1
NC_017162:270460:276845276845277414570Acinetobacter baumannii 1656-2 chromosome, complete genometransposase5e-1375.1
NC_017278:1720371:1738413173841317395041092Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein1e-1273.9
NC_017278:258921:2668802668802679711092Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein1e-1273.9
NC_017278:258921:2717152717152728061092Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein1e-1273.9
NC_017278:48630:6760267602686931092Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein1e-1273.9
NC_015161:523278:5303175303175313781062Deinococcus proteolyticus MRP chromosome, complete genometransposase IS4 family protein9e-1064.3
NC_015170:54000:6160861608626811074Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequencetransposase IS4 family protein1e-0963.9
NC_015161:36668:4645046450475231074Deinococcus proteolyticus MRP chromosome, complete genometransposase IS4 family protein1e-0963.9
NC_013946:415028:4319264319264329901065Meiothermus ruber DSM 1279 chromosome, complete genometransposase IS4 family protein4e-0962
NC_008025:1889891:1899216189921619002741059Deinococcus geothermalis DSM 11300, complete genometransposase, IS45e-0858.5
NC_008010:36978:4586845868469261059Deinococcus geothermalis DSM 11300 plasmid 1, complete sequencetransposase, IS45e-0858.5