Pre_GI: BLASTP Hits

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Query: NC_001263:132288:135167 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 135167, End: 136204, Length: 1038

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010424:697187:7436247436247447721149Candidatus Desulforudis audaxviator MP104C, complete genomeprotein of unknown function DUF4502e-0860.1
NC_015680:1275252:128018612801861281052867Pyrococcus yayanosii CH1 chromosome, complete genomehypothetical protein6e-0858.5
NC_018678:2382708:2404330240433024053971068Alteromonas macleodii str. 'English Channel 673' chromosome,hypothetical protein6e-0652