Pre_GI: BLASTP Hits

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Query: NC_001263:132288:134747 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 134747, End: 135130, Length: 384

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009617:4761000:476465447646544765001348Clostridium beijerinckii NCIMB 8052 chromosome, complete genomearsenate reductase-like protein9e-22102
NC_015589:38418:653646536465696333Desulfotomaculum ruminis DSM 2154 chromosome, complete genomearsenate reductase-like protein4e-2096.7
NC_020291:1810527:182904018290401829405366Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeglutaredoxin family protein, arsenate reductase3e-1993.6
NC_016048:2734563:275348627534862753821336Oscillibacter valericigenes Sjm18-20, complete genomeputative oxidoreductase2e-1788.2
NC_015500:2866027:286951728695172869903387Treponema brennaborense DSM 12168 chromosome, complete genomearsenate reductase like protein3e-1477
NC_015577:3688071:370381437038143704149336Treponema azotonutricium ZAS-9 chromosome, complete genomeArsC family protein1e-1374.7
NC_014484:762710:769569769569769922354Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein2e-1374.3
NC_017078:179848:180863180863181198336Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1,putative arsenate reductase8e-1268.9
NC_014935:342491:360581360581360925345Nitratifractor saLSUginis DSM 16511 chromosome, complete genomearsenate reductase and related protein7e-0752.8