Pre_GI: BLASTP Hits

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Query: NC_001263:132288:133386 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 133386, End: 133730, Length: 345

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019897:329945:373241373241373804564Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein1e-29128
NC_016935:3103430:311943731194373120015579Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein3e-27120
NC_015690:2553837:256991625699162570494579Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein4e-27119
NC_017075:1233377:124614812461481246690543Rubrivivax gelatinosus IL144, complete genomeMOSC domain-containing protein5e-26116
NC_018524:4988810:500231350023135002852540Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeMOSC domain protein4e-24110
NC_007644:2205599:223135622313562231793438Moorella thermoacetica ATCC 39073, complete genomeMOSC5e-1063.2
NC_014220:587826:587826587826588269444Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeMOSC domain containing protein1e-0858.5
NC_018870:115982:161575161575162036462Thermacetogenium phaeum DSM 12270 chromosome, complete genomeMOSC domain-containing protein3e-0857.4
NC_011830:1504497:150997315099731510407435Desulfitobacterium hafniense DCB-2, complete genomeMOSC domain containing protein5e-0753.1
NC_015574:1046500:106539810653981065853456Methanobacterium sp. SWAN-1 chromosome, complete genomeMOSC domain-containing protein6e-0649.7