Pre_GI: SWBIT SVG BLASTP

Query: NC_017265:644384 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.

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BLASTP Alignment.txt

Subject: NC_009925:4997000 Acaryochloris marina MBIC11017, complete genome

Lineage: Acaryochloris marina; Acaryochloris; ; Chroococcales; Cyanobacteria; Bacteria

General Information: Acaryochloris marina MBIC11017 was isolated from algae from the coast of the Palau Islands in the western Pacific. Marine cyanobacterium. Acaryochloris marina was first isolated as an epiphyte of algae. M. marina been isolated from a variety of habitats and locations, usually associated with algae but also as free-living organisms. This cyanobacterium produces an atypical photosynthetic pigment, chlorophyll d, as the major reactive agent. The oxygenic photosynthesis based on this pigment may have evolved as an acclimatization to far-red light environments, or an as intermediate between the red-absorbing oxygenic and the far-red-absorbing anoxygenic photosynthesis that uses bacteriochlorophylls. Because of the unusual ratio of chlorophyll a to chlorophyll d in this organism, it has been used as a model to study the spectrographic characteristics of the two pigments.