Pre_GI: SWBIT SVG BLASTP

Query: NC_015164:4023881 Bacteroides salanitronis DSM 18170 chromosome, complete genome

Lineage: Bacteroides salanitronis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: Country: Japan; Environment: Host; Isolation: caecum of chicken; Temp: Mesophile; Temp: 37C. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. This organism produces many extracellular enzymes which assist in the breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides. Bacteroides salanitronis is a species of strictly anaerobic, non-spore-forming, non-motile, Gram-negative rods. It was isolated from caecum of a healthy chicken.

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BLASTP Alignment.txt

Subject: NC_004603:230000 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.