Pre_GI: SWBIT SVG BLASTP

Query: NC_012917:1506083 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.

- Sequence; - BLASTP hit: hover for score (Low score = Light, High score = Dark);
- hypothetical protein; - cds: hover for description

BLASTP Alignment.txt

Subject: NC_014935:1389000 Nitratifractor saLSUginis DSM 16511 chromosome, complete genome

Lineage: Nitratifractor salsuginis; Nitratifractor; ; Campylobacterales; Proteobacteria; Bacteria

General Information: Country: Japan; Isolation: Deep-sea hydrothermal vent chimney; Temp: Mesophile; Temp: 37C. This organism was isolated from the Iheya North hydrothermal field inthe Mid-Okinawa Trough, Japan. It is a strict chemolithoautotroph, growing byrespiratory nitrate reduction with H2, forming N2 as a metabolic product.