Pre_GI: SWBIT SVG BLASTP

Query: NC_011959:972798 Thermomicrobium roseum DSM 5159, complete genome

Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.

- Sequence; - BLASTP hit: hover for score (Low score = Light, High score = Dark);
- hypothetical protein; - cds: hover for description

BLASTP Alignment.txt

Subject: NC_006624:2016000 Thermococcus kodakarensis KOD1, complete genome

Lineage: Thermococcus kodakarensis; Thermococcus; Thermococcaceae; Thermococcales; Euryarchaeota; Archaea

General Information: This organism was originally identified as Pyrococcus sp. strain KOD1. It was isolated from a solfatara on Kodakara Island, Japan. Hyperthermophilic archeon. This genus is a member of the order Thermococcales in the Euryarchaeota. Thermococcus sp. are the most commonly isolated hyperthermophilic organisms and are often isolated from marine hydrothermal vents and terrestrial hot sulfur springs. Elemental sulfur is either required for, or stimulates, growth. These obligate heterotrophs can ferment a variety of organic compounds, including peptides, amino acids, and sugars in the absence of sulfur. Thermococcus kodakaraensis is a hyperthermophilic archeon. Proteins from this organism have been extensively studied to find thermostable enzymes for industrial and biotechnological applications.