Pre_GI: SWBIT SVG BLASTP

Query: NC_011374:325507 Ureaplasma urealyticum serovar 10 str. ATCC 33699 chromosome,

Lineage: Ureaplasma urealyticum; Ureaplasma; Mycoplasmataceae; Mycoplasmatales; Tenericutes; Bacteria

General Information: Causes a wide range of infections of the urogenital or respiratory tracts. Ureaplasma urealyticum is part of the normal flora of the human urogenital tract. This organism, however, can cause urethritis and has been associated with spontaneous abortion, premature birth, meningitis, and a severe respiratory disease of premature infants. U. urealyticum strains exhibit antigenic heterogeneity. Isolates obtained from human urogenital tract have been classified into 14 recognized serovars which show no serological cross-reactivity with ureaplasmas from other hosts and uniquely express human immuoglobulin A1 protease activity.

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BLASTP Alignment.txt

Subject: NC_011959:972798 Thermomicrobium roseum DSM 5159, complete genome

Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.