Pre_GI: SWBIT SVG BLASTP

Query: NC_010673:479552 Borrelia hermsii DAH, complete genome

Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.

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BLASTP Alignment.txt

Subject: NC_014654:2101500 Halanaerobium sp. 'sapolanicus' chromosome, complete genome

Lineage: Halanaerobium hydrogeniformans; Halanaerobium; Halanaerobiaceae; Halanaerobiales; Firmicutes; Bacteria

General Information: Environment: Fresh water, Sediment; Temp: Mesophile; Temp: 34 - 42C. Organisms identified in the genus Halanaerobium (also known as Haloanaerobium) were first isolated from the Great Salt Lake in Utah, USA and have since been isolated from diverse saline environments such as oil reserviors, brine-seawater interfaces and hypersaline sediments. These bacteria are extremely salt-tolerant and are able to grow in concentrations of salt as high as 25%.