Pre_GI: SWBIT SVG BLASTP

Query: NC_009381:1414985 Yersinia pestis Pestoides F chromosome, complete genome

Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.

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BLASTP Alignment.txt

Subject: NC_007969:1076287 Psychrobacter cryohalolentis K5, complete genome

Lineage: Psychrobacter cryohalolentis; Psychrobacter; Moraxellaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism was isolated from saline liquid (12-14%) found 11-24 m below the surface within a forty thousand-year-old Siberian permafrost at the Kolyma-Indigirka lowland in Siberia. Psychrotolerant organism. These bacteria are commonly isolated from low temperature environments, Psychrobacter spp. are cold-adapted organisms that are often isolated from extreme environments such as permafrost or the Antarctic ice. Psychrobacter cryohalolentis, formerly Psychrobacter cryopegella is an psychrotolerant bacterium. This organism can grow at -10 degrees C with rapid growth at these temperatures.