Pre_GI: SWBIT SVG BLASTP

Query: NC_008228:2068641 Pseudoalteromonas atlantica T6c, complete genome

Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.

- Sequence; - BLASTP hit: hover for score (Low score = Light, High score = Dark);
- hypothetical protein; - cds: hover for description

BLASTP Alignment.txt

Subject: NC_015731:2811579 Nitrosomonas sp. Is79A3 chromosome, complete genome

Lineage: Nitrosomonas; Nitrosomonas; Nitrosomonadaceae; Nitrosomonadales; Proteobacteria; Bacteria

General Information: Environment: Fresh water; Isolation: freshwater lake; Temp: Mesophile. Nitrosomonas sp. (strain Is79A3) is an aerobic, chemoautotrophic, Gram-negative bacterium isolated from freshwater lake. It oxidizes ammonia into nitrite. Nitrosomonas sp. are useful in treatment of industrial and sewage waste and in the process of bioremediation.