Pre_GI: SWBIT SVG BLASTP

Query: NC_006677:1596560 Gluconobacter oxydans 621H, complete genome

Lineage: Gluconobacter oxydans; Gluconobacter; Acetobacteraceae; Rhodospirillales; Proteobacteria; Bacteria

General Information: Industrially useful bacterium. Gluconobacter oxydans is a member of the Acetobacteraceae family within the alpha proteobacteria and can be isolated from flowers, fruits, and fermented beverages. This organism uses membrane-associated dehydrogenases to incompletely oxidize a wide variety of carbohydrates and alcohols. Oxidation occurs in the periplasm with the products being released into the medium via outer membrane porins and the electrons entering the electron transport chain. Able to oxidize large amounts of substrates, making it useful for industrial purposes. Among other applications, it has been used to produce 2-ketogluconic for iso-ascorbic acid production, 5-ketogluconic acid from glucose for tartaric acid production, and L-sorbose from sorbitol for vitamin C synthesis.

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BLASTP Alignment.txt

Subject: NC_003304:2507000 Agrobacterium tumefaciens str. C58 chromosome circular, complete

Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Gram-negative soil bacterium. This is the most widely studied species in the genus. Strains of Agrobacterium are classified in three biovars based on their utilisation of different carbohydrates and other biochemical tests. The differences between biovars are determined by genes on the single circle of chromosomal DNA. Biovar differences are not particularly relevant to the pathogenicity of A. tumefaciens, except in one respect: biovar 3 is found worldwide as the pathogen of gravevines. This species causes crown gall disease of a wide range of dicotyledonous (broad-leaved) plants, especially members of the rose family such as apple, pear, peach, cherry, almond, raspberry and roses. Because of the way that it infects other organisms, this bacterium has been used as a tool in plant breeding. Any desired genes, such as insecticidal toxin genes or herbicide-resistance genes, can be engineered into the bacterial DNA, and then inserted into the plant genome. This process shortens the conventional plant breeding process, and allows entirely new (non-plant) genes to be engineered into crops.