Pre_GI: SWBIT SVG BLASTP

Query: NC_003305:1297785 Agrobacterium tumefaciens str. C58 chromosome linear, complete

Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Gram-negative soil bacterium. This is the most widely studied species in the genus. Strains of Agrobacterium are classified in three biovars based on their utilisation of different carbohydrates and other biochemical tests. The differences between biovars are determined by genes on the single circle of chromosomal DNA. Biovar differences are not particularly relevant to the pathogenicity of A. tumefaciens, except in one respect: biovar 3 is found worldwide as the pathogen of gravevines. This species causes crown gall disease of a wide range of dicotyledonous (broad-leaved) plants, especially members of the rose family such as apple, pear, peach, cherry, almond, raspberry and roses. Because of the way that it infects other organisms, this bacterium has been used as a tool in plant breeding. Any desired genes, such as insecticidal toxin genes or herbicide-resistance genes, can be engineered into the bacterial DNA, and then inserted into the plant genome. This process shortens the conventional plant breeding process, and allows entirely new (non-plant) genes to be engineered into crops.

- Sequence; - BLASTP hit: hover for score (Low score = Light, High score = Dark);
- hypothetical protein; - cds: hover for description

BLASTP Alignment.txt

Subject: NC_005861:2120633 Candidatus Protochlamydia amoebophila UWE25, complete genome

Lineage: Protochlamydia amoebophila; Protochlamydia; Parachlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: An endosymbiont of free-living amoebae (Acanthamoeba sp. endosymbiont UWE25) and implicated as a potential human pathogen this strain is an environmental isolate. Amoeba endosymbiont. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. Candidatus Protochlamydia amoebophila, originally Parachlamydia is an endosymbiont of free-living amoebae (Acanthamoeba). This organism is an obligate intracellular endosymbiont and lives in small inclusions dispersed throughout the host cell.