Pre_GI: SWBIT SVG BLASTP

Query: NC_003063:757999 Agrobacterium tumefaciens str. C58 chromosome linear, complete

Lineage: Agrobacterium fabrum; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain is a biovar 1 nopaline-producing strain originally isolated from a cherry tree tumor. Strains of Agrobacterium are classified in three biovars based on their utilisation of different carbohydrates and other biochemical tests. The differences between biovars are determined by genes on the single circle of chromosomal DNA. Biovar differences are not particularly relevant to the pathogenicity of A. tumefaciens, except in one respect: biovar 3 is found worldwide as the pathogen of gravevines. This species causes crown gall disease of a wide range of dicotyledonous (broad-leaved) plants, especially members of the rose family such as apple, pear, peach, cherry, almond, raspberry and roses. Because of the way that it infects other organisms, this bacterium has been used as a tool in plant breeding. Any desired genes, such as insecticidal toxin genes or herbicide-resistance genes, can be engineered into the bacterial DNA, and then inserted into the plant genome. This process shortens the conventional plant breeding process, and allows entirely new (non-plant) genes to be engineered into crops.

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BLASTP Alignment.txt

Subject: NC_007964:717590 Nitrobacter hamburgensis X14, complete genome

Lineage: Nitrobacter hamburgensis; Nitrobacter; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrobacter hamburgensis X14 was isolated from soil. Nitrite-oxidizing soil bacterium. Members of this genus are found in marine, freshwater, and terrestrial habitats, often in association with ammonia-oxidizing bacteria. These organisms oxidize nitrite, generated by the oxidation of ammonia, to nitrate and play an important role in the global nitrogen cycle. The enzyme involved in nitrite oxidation, nitrite oxidoreductase, can also reduce nitrate to nitrite in the absence of oxygen, allowing Nitrobacter sp. to grow anaerobically. Nitrobacter hamburgensis is commonly isolated from freshwater, soil, and sewage sludge. This organism has been used in biofilms to remove nitrogen from wastewater.