Pre_GI: SWBIT SVG BLASTN

Query: NC_017214:379728 Bifidobacterium animalis subsp. lactis BB-12 chromosome, complete

Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.

- Sequence; - BLASTN hit (Low score = Light, High score = Dark)
- hypothetical protein; - cds: hover for description

BLASTN Alignment.txt

Subject: NC_008554:4839116 Syntrophobacter fumaroxidans MPOB, complete genome

Lineage: Syntrophobacter fumaroxidans; Syntrophobacter; Syntrophobacteraceae; Syntrophobacterales; Proteobacteria; Bacteria

General Information: This organism is a syntrophic propionate-oxidizing bacterium isolated from granular sludge from an anaerobic sludge bed reactor treating sugar-beet processing wastewater. Propionate-oxidizing bacterium. This organism is able to oxidize propionate when grown in co-culture with hydrogen-consuming methanogens (syntrophic metabolism). This organism can also ferment fumarate when not in co-culture.