Pre_GI: SWBIT SVG BLASTN

Query: NC_016602:173314 Vibrio furnissii NCTC 11218 chromosome 1, complete sequence

Lineage: Vibrio furnissii; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio furnissii, formerly Vibrio fluvialis biovar II, is occassionally isolated from diarrheal cases, but it has not been confirmed as the causative agent in most cases. Vibrio furnissii is a widespread, free-living, marine bacterium that is associated with crustacean zoonoses and acute gastroenteritis in humans.

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BLASTN Alignment.txt

Subject: NC_007606:3784847 Shigella dysenteriae Sd197, complete genome

Lineage: Shigella dysenteriae; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic in China in the 1950s. Causes bacillary dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. Shigella dysenteriae is the major cause of Shigella-related deaths in developing nations, mostly in young children.