Pre_GI: SWBIT SVG BLASTN

Query: NC_015761:299386 Salmonella bongori NCTC 12419, complete genome

Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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BLASTN Alignment.txt

Subject: NC_012491:743883 Brevibacillus brevis NBRC 100599, complete genome

Lineage: Brevibacillus brevis; Brevibacillus; Paenibacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Strictly aerobic, Gram-positive, spore-forming soil bacterium. When faced with nutritional stress, this species develops genetic competance and motility, sporulates, and produces antibiotics during the transition between the exponential and stationary phases. The genes involved in antibiotic production have been well characterized and have led to the commercial production of tyrocidine and gramicidin.