Pre_GI: SWBIT SVG BLASTN

Query: NC_015760:61345 Streptococcus salivarius CCHSS3, complete genome

Lineage: Streptococcus salivarius; Streptococcus; Streptococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: The commensal bacterium Streptococcus salivarius is predominant specie of the human oropharyngeal tract and exerts an important role in oral ecology. Streptococcus salivarius is an aerobic, gram-positive coccus. This organism is the most common organism isolated from the human oral cavity. Streptococcus salivarius can also be an opportunistic pathogen causing endocarditis, blood infection, and peritonitis. Streptococci are Gram-positive, nonmotile, nonsporeforming, catalase-negative cocci that occur in pairs or chains. Members of this genus vary widely in pathogenic potential. Most streptococci are facultative anaerobes, and some are obligate anaerobes.

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BLASTN Alignment.txt

Subject: NC_003997:5200805 Bacillus anthracis str. Ames, complete genome

Lineage: Bacillus anthracis; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: This well studied laboratory strain (Porton isolate) is not virulent due to the loss of the two plasmids, pXO1 and pXO2. Under starvation conditions this group of bacteria initiate a pathway that leads to endospore formation, a process that is thoroughly studied and is a model system for prokaryotic development and differentiation. Spores are highly resistant to heat, cold, dessication, radiation, and disinfectants, and enable the organism to persist in otherwise inhospitable environments. Under more inviting conditions the spores germinate to produce vegetative cells. This organism was the first to be shown to cause disease by Dr. Louis Pasteur (the organism, isolated from sick animals, was grown in the laboratory and then used to infect healthy animals and make them sick). This organism was also the first for which an attenuated strain was developed as a vaccine. Herbivorous animals become infected with the organism when they ingest spores from the soil whereas humans become infected when they come into contact with a contaminated animal. PA/LF and PA/EF complexes are internalized by host cells where the LF (metalloprotease) and EF (calmodulin-dependent adenylate cyclase) components act. At high levels LF induces cell death and release of the bacterium while EF increases host susceptibility to infection and promotes fluid accumulation in the cells.